Uses of Class
inra.ijpb.data.Cursor3D
Package | Description |
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inra.ijpb.data |
Some utility classes for accessing image data.
|
inra.ijpb.data.image |
Some classes to access image data in a unified and hopefully efficient way.
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inra.ijpb.label |
Utility methods for label images (stored as 8-, 16- or 32-bits).
|
inra.ijpb.measure.region3d |
Quantitative measurements on 3D label / binary images of regions.
|
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Uses of Cursor3D in inra.ijpb.data
Methods in inra.ijpb.data that return Cursor3D Modifier and Type Method Description Cursor3D
Neighborhood3D. getCursor()
Cursor3D
VoxelRecord. getCursor()
Methods in inra.ijpb.data that return types with arguments of type Cursor3D Modifier and Type Method Description abstract java.lang.Iterable<Cursor3D>
Neighborhood3D. getNeighbors()
java.lang.Iterable<Cursor3D>
Neighborhood3DC26. getNeighbors()
java.lang.Iterable<Cursor3D>
Neighborhood3DC6. getNeighbors()
Methods in inra.ijpb.data with parameters of type Cursor3D Modifier and Type Method Description double
Cursor3D. euclideanDistance(Cursor3D c)
Calculate Euclidean distance to another cursorvoid
Neighborhood3D. setCursor(Cursor3D cursor)
Sets the position of the Neighborhood3D.Constructors in inra.ijpb.data with parameters of type Cursor3D Constructor Description VoxelRecord(Cursor3D cursor, double value)
Creates a voxel record from a cursor and a double value. -
Uses of Cursor3D in inra.ijpb.data.image
Methods in inra.ijpb.data.image with parameters of type Cursor3D Modifier and Type Method Description double
ByteStackWrapper. getValue(Cursor3D pos)
double
FloatStackWrapper. getValue(Cursor3D pos)
double
Image3D. getValue(Cursor3D pos)
Returns the value at the specified coordinates as a double.double
ShortStackWrapper. getValue(Cursor3D pos)
void
ByteStackWrapper. setValue(Cursor3D pos, double value)
void
FloatStackWrapper. setValue(Cursor3D pos, double value)
void
Image3D. setValue(Cursor3D pos, double value)
Changes the value at the specified coordinates, using a double to specify the new value.void
ShortStackWrapper. setValue(Cursor3D pos, double value)
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Uses of Cursor3D in inra.ijpb.label
Methods in inra.ijpb.label that return Cursor3D Modifier and Type Method Description static Cursor3D[]
LabelValues. findPositionOfMaxValues(ij.ImageStack valueImage, ij.ImageStack labelImage, int[] labels)
For each label, finds the position of the point belonging to label region defined bylabelImage
and with maximal value in intensity imagevalueImage
.static Cursor3D[]
LabelValues. findPositionOfMinValues(ij.ImageStack valueImage, ij.ImageStack labelImage, int[] labels)
For each label, finds the position of the point belonging to label region defined bylabelImage
and with minimal value in intensity imagevalueImage
.Cursor3D
LabelValues.Position3DValuePair. getPosition()
Returns the position of the voxel.Constructors in inra.ijpb.label with parameters of type Cursor3D Constructor Description Position3DValuePair(Cursor3D position, double value)
Creates a new Position3DValuePair instance based on a position and a value. -
Uses of Cursor3D in inra.ijpb.measure.region3d
Fields in inra.ijpb.measure.region3d declared as Cursor3D Modifier and Type Field Description Cursor3D
GeodesicDiameter3D.Result. firstExtremity
The first geodesic extremity found by the algorithm.Cursor3D
GeodesicDiameter3D.Result. initialPoint
The initial point used for propagating distances, corresponding the center of one of the minimum inscribed circles.Cursor3D
GeodesicDiameter3D.Result. secondExtremity
The second geodesic extremity found by the algorithm.