Package inra.ijpb.measure.region2d

Class MaxFeretDiameter

java.lang.Object
inra.ijpb.algo.AlgoStub
inra.ijpb.measure.region2d.RegionAnalyzer2D<PointPair2D>
inra.ijpb.measure.region2d.MaxFeretDiameter
All Implemented Interfaces:
Algo, RegionAnalyzer<PointPair2D>
public class MaxFeretDiameter
extends RegionAnalyzer2D<PointPair2D>
Computes maximum Feret Diameter for each region of a binary or label image.
Author:
dlegland
See Also:
MaxFeretDiameter3D

  • Constructor Summary

    Constructors
    Constructor Description
    MaxFeretDiameter()
    Default constructor

  • Method Summary

    Modifier and Type Method Description
    PointPair2D analyzeBinary​(ij.process.ImageProcessor image, double[] calib)
    Computes Maximum Feret diameter from a single region in a binary image.
    PointPair2D[] analyzeRegions​(ij.process.ImageProcessor image, int[] labels, ij.measure.Calibration calib)
    Computes maximum Feret Diameter for each label of the input label image.
    ij.measure.ResultsTable createTable​(java.util.Map<java.lang.Integer,​PointPair2D> maxDiamsMap)
    Converts the result of maximum Feret diameters computation to a ResultsTable that can be displayed within ImageJ.
    static PointPair2D[] maxFeretDiameters​(ij.process.ImageProcessor image, int[] labels, ij.measure.Calibration calib)
    Computes Feret diameters as a PointPair2D for each of the specified regions within a label map.

    Methods inherited from class inra.ijpb.measure.region2d.RegionAnalyzer2D

    analyzeRegions, analyzeRegions, computeTable

    Methods inherited from class inra.ijpb.algo.AlgoStub

    addAlgoListener, removeAlgoListener

    Methods inherited from class java.lang.Object

    equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

  • Constructor Details

    • MaxFeretDiameter

      public MaxFeretDiameter()
      Default constructor

  • Method Details

    • maxFeretDiameters

      public static final PointPair2D[] maxFeretDiameters​(ij.process.ImageProcessor image, int[] labels, ij.measure.Calibration calib)
      Computes Feret diameters as a PointPair2D for each of the specified regions within a label map.
      Parameters:
      image - the label map corresponding to the label image
      labels - the array of region labels to process
      calib - the spatial calibration of the image
      Returns:
      the array of Feret diameter results

    • createTable

      public ij.measure.ResultsTable createTable​(java.util.Map<java.lang.Integer,​PointPair2D> maxDiamsMap)
      Converts the result of maximum Feret diameters computation to a ResultsTable that can be displayed within ImageJ.
      Parameters:
      maxDiamsMap - the map of PointPair2D for each label within a label image
      Returns:
      a ResultsTable instance

    • analyzeRegions

      public PointPair2D[] analyzeRegions​(ij.process.ImageProcessor image, int[] labels, ij.measure.Calibration calib)
      Computes maximum Feret Diameter for each label of the input label image. Computes diameter between corners of image pixels, so the result is always greater than or equal to one.
      Specified by:
      analyzeRegions in class RegionAnalyzer2D<PointPair2D>
      Parameters:
      image - a label image (8, 16 or 32 bits)
      labels - the set of labels within the image
      calib - the spatial calibration of the image
      Returns:
      an array of PointPair2D representing the coordinates of extreme points, in calibrated coordinates.

    • analyzeBinary

      public PointPair2D analyzeBinary​(ij.process.ImageProcessor image, double[] calib)
      Computes Maximum Feret diameter from a single region in a binary image. Computes diameter between corners of image pixels, so the result is always greater than or equal to one.
      Parameters:
      image - a binary image representing the particle.
      calib - the spatial calibration
      Returns:
      the maximum Feret diameter of the binary region