L-Index

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L

label1 - Variable in class inra.ijpb.label.RegionAdjacencyGraph.LabelPair: The first label.
label2 - Variable in class inra.ijpb.label.RegionAdjacencyGraph.LabelPair: The second label.
LabelAreaOpeningPlugin - Class in inra.ijpb.plugins
LabelAreaOpeningPlugin() - Constructor for class inra.ijpb.plugins.LabelAreaOpeningPlugin
labelBoundaries(ImageStack) - Static method in class inra.ijpb.label.LabelImages: Creates a binary 3D image that contains 255 for voxels that are boundaries between two labels.
labelBoundaries(ImageProcessor) - Static method in class inra.ijpb.label.LabelImages: Creates a binary 2D image that contains 255 for pixels that are boundaries between two labels.
LabelBoundariesLabeling2D - Class in inra.ijpb.label.conncomp: Computes a label map of the boundaries between regions from a label map.
LabelBoundariesLabeling2D() - Constructor for class inra.ijpb.label.conncomp.LabelBoundariesLabeling2D
LabelBoundariesLabeling2D.Result - Class in inra.ijpb.label.conncomp: Provides the result of a boundary labeling.
LabelBoundariesLabeling3D - Class in inra.ijpb.label.conncomp: Computes a label map of the boundaries between regions from a label map.
LabelBoundariesLabeling3D() - Constructor for class inra.ijpb.label.conncomp.LabelBoundariesLabeling3D
LabelBoundariesLabeling3D.Result - Class in inra.ijpb.label.conncomp: Provides the result of a boundary labeling.
LabelBoundariesPlugin - Class in inra.ijpb.plugins
LabelBoundariesPlugin() - Constructor for class inra.ijpb.plugins.LabelBoundariesPlugin
LabelDilation2DShort - Class in inra.ijpb.label.distmap: Deprecated.
replaced by inra.ijpb.label.filter.ChamferLabelDilation2DShort
LabelDilation2DShort(ChamferMask2D) - Constructor for class inra.ijpb.label.distmap.LabelDilation2DShort: Deprecated.

Creates a new image processor for dilating labels using the specified chamfer mask, using 16-bits integer computation.
LabelDilation3D4WShort - Class in inra.ijpb.label.distmap: Deprecated.
replaced by LabelDilation3DShort (since 1.4.4)
LabelDilation3D4WShort(short[]) - Constructor for class inra.ijpb.label.distmap.LabelDilation3D4WShort: Deprecated.

Creates a new image processor for dilating labels using chamfer weight stored using shorts.
LabelDilation3D4WShort(ChamferWeights3D) - Constructor for class inra.ijpb.label.distmap.LabelDilation3D4WShort: Deprecated.

Creates a new image processor for dilating labels using chamfer weight stored using shorts.
LabelDilation3DShort - Class in inra.ijpb.label.distmap: Deprecated.
replaced by inra.ijpb.label.filter.ChamferLabelDilation3DShort
LabelDilation3DShort(ChamferMask3D) - Constructor for class inra.ijpb.label.distmap.LabelDilation3DShort: Deprecated.

Creates a new 3D image for dilating labels using the specified chamfer mask, using 16-bits integer computation.
LabelDilationShort5x5 - Class in inra.ijpb.label.distmap: Deprecated.
replaced by LabelDilation2DShort (since 1.5.0)
LabelDilationShort5x5(short[]) - Constructor for class inra.ijpb.label.distmap.LabelDilationShort5x5: Deprecated.

Creates a new LabelDilation operator.
LabelDilationShort5x5(ChamferWeights) - Constructor for class inra.ijpb.label.distmap.LabelDilationShort5x5: Deprecated.

Creates a new LabelDilation operator.
LabelEdition - Class in inra.ijpb.plugins: Plugin for the manual edition of label images (2D and 3D).
LabelEdition() - Constructor for class inra.ijpb.plugins.LabelEdition
LabeledVoxelsMeasure - Class in inra.ijpb.measure: Mother class to extract measures from pairs of grayscale and labeled images.
LabeledVoxelsMeasure(ImagePlus, ImagePlus) - Constructor for class inra.ijpb.measure.LabeledVoxelsMeasure: Initialize the measurements by reading the input (grayscale) image and its corresponding labels.
LabelImages - Class in inra.ijpb.label: Utility methods for label images (stored as 8-, 16- or 32-bits).
LabelImages - Class in inra.ijpb.morphology: Deprecated.
as from 2014.11.03, replaced by class inra.ijpb.label.LabelImages
LabelingPlugin - Class in inra.ijpb.plugins: Computes label image of connected components in a binary planar image or 3D stack.
LabelingPlugin() - Constructor for class inra.ijpb.plugins.LabelingPlugin
labelMap - Variable in class inra.ijpb.binary.conncomp.FloodFillComponentsLabeling.Result: The image processor containing labels of connected components, or 0 for background.
labelMap - Variable in class inra.ijpb.binary.conncomp.FloodFillComponentsLabeling3D.Result: The image stack containing labels of connected components, or 0 for background.
LabelMapMorphologicalFilteringPlugin - Class in inra.ijpb.plugins: Applies morphological filtering on a label image.
LabelMapMorphologicalFilteringPlugin() - Constructor for class inra.ijpb.plugins.LabelMapMorphologicalFilteringPlugin
LabelMapMorphologicalFilteringPlugin.Operation - Enum in inra.ijpb.plugins: A pre-defined set of basis morphological operations, that can be easily used with a GenericDialog.
labelMapOverlay(ImagePlus, ImagePlus, double) - Static method in class inra.ijpb.data.image.ColorImages: Applies an overlay of a label map onto a 2D/3D grayscale image, using the specified opacity.
labelMapOverlay(ImageStack, ImageStack, double) - Static method in class inra.ijpb.data.image.ColorImages: Applies an overlay of a label map onto a 3D grayscale image, using the specified opacity.
labelMapOverlay(ImageProcessor, ImageProcessor, double) - Static method in class inra.ijpb.data.image.ColorImages: Applies an overlay of a label map onto a grayscale image, using the specified opacity.
LabelOverlapMeasures - Class in inra.ijpb.plugins: This class implements a plugin to calculate overlap measurements over an source and a target label image (2D or 3D).
LabelOverlapMeasures() - Constructor for class inra.ijpb.plugins.LabelOverlapMeasures
LabelPair(int, int) - Constructor for class inra.ijpb.label.RegionAdjacencyGraph.LabelPair: Creates a new Label Pair.
LabelSizeFiltering - Class in inra.ijpb.label.select: Filter labels using a size criterion.
LabelSizeFiltering(RelationalOperator, int) - Constructor for class inra.ijpb.label.select.LabelSizeFiltering: Default constructor, specifying the operator and the size limit.
LabelSizeFilteringPlugin - Class in inra.ijpb.plugins: Filter labels within a label image using a size criterion.
LabelSizeFilteringPlugin() - Constructor for class inra.ijpb.plugins.LabelSizeFilteringPlugin
LabelSizeFilteringPlugin.Operation - Enum in inra.ijpb.plugins: A pre-defined set of Labels for populating plugin.
labelToRgb(ImagePlus, byte[][], Color) - Static method in class inra.ijpb.label.LabelImages: Creates a new Color image from a label image, a LUT, and a color for background.
labelToRgb(ImageStack, byte[][], Color) - Static method in class inra.ijpb.label.LabelImages: Creates a new Color image stack from a label image stack, a LUT, and a color for background.
labelToRgb(ImageProcessor, byte[][], Color) - Static method in class inra.ijpb.label.LabelImages: Creates a new Color image from a label planar image, a LUT, and a color for background.
LabelToRgbPlugin - Class in inra.ijpb.plugins: Creates a new Color Image that associate a given color to each label of the input image.
LabelToRgbPlugin() - Constructor for class inra.ijpb.plugins.LabelToRgbPlugin
LabelToValuePlugin - Class in inra.ijpb.plugins: Combines a label image and the values within a column of a results table to create a new image with intensity corresponding to the vales in the table column.
LabelToValuePlugin() - Constructor for class inra.ijpb.plugins.LabelToValuePlugin
LabelUtils - Class in inra.ijpb.label: A collection of utility methods for working with label images.
LabelValues - Class in inra.ijpb.label: Utility methods for combining label images and intensity images.
LabelValues.Position3DValuePair - Class in inra.ijpb.label: Inner class for storing a value associated to a 3D position.
LabelValues.PositionValuePair - Class in inra.ijpb.label: Inner class for storing a value associated to a 2D position.
laplacian(ImagePlus, Strel3D) - Static method in class inra.ijpb.morphology.Morphology: Computes the morphological Laplacian of the 3D input image.
laplacian(ImageStack, Strel3D) - Static method in class inra.ijpb.morphology.Morphology: Computes the morphological Laplacian of the 3D input image.
laplacian(ImageProcessor, Strel) - Static method in class inra.ijpb.morphology.Morphology: Computes the morphological Laplacian of the input image.
Laplacian - Class in inra.ijpb.morphology.filter: Computes the morphological Laplacian of the input image.
Laplacian(Strel3D) - Constructor for class inra.ijpb.morphology.filter.Laplacian: Creates a new Morphological Laplacian operator with the specified structuring element.
LAPLACIAN - inra.ijpb.morphology.Morphology.Operation: Morphological laplacian (difference of external gradient with internal gradient)
LargestInscribedBall - Class in inra.ijpb.measure.region3d: Computes the largest inscribed ball for each region of a label or binary image.
LargestInscribedBall() - Constructor for class inra.ijpb.measure.region3d.LargestInscribedBall: Empty constructor.
largestInscribedBalls(ImageStack, int[], Calibration) - Static method in class inra.ijpb.measure.region3d.LargestInscribedBall: Computes largest inscribed ball of each region with a 3D label image.
LargestInscribedCircle - Class in inra.ijpb.measure.region2d: Computes the largest inscribed circle for each region of a label or binary image.
LargestInscribedCircle() - Constructor for class inra.ijpb.measure.region2d.LargestInscribedCircle: Default empty constructor.
largestInscribedCircles(ImageProcessor, int[], Calibration) - Static method in class inra.ijpb.measure.region2d.LargestInscribedCircle: Computes largest inscribed disk of each region within a label image.
largestPossibleLabel(int) - Static method in class inra.ijpb.binary.conncomp.FloodFillComponentsLabeling: Returns the largest possible label that can be obtained given the specified bit-depth.
LE - inra.ijpb.plugins.LabelSizeFilteringPlugin.Operation: The operator for "greater than or equal"
LE - Static variable in interface inra.ijpb.label.select.RelationalOperator: Implementation of the "Lower Than Or Equal" operator.
LEFT - Static variable in class inra.ijpb.morphology.strel.ShiftedCross3x3Strel: A cross-shaped structuring element located on the left of the reference pixel.
length() - Method in class inra.ijpb.geometry.OrientedBox2D
LIGHT_GRAY - inra.ijpb.color.CommonColors: The light gray color
LIGHT_GRAY - inra.ijpb.util.CommonColors: Deprecated.

The light gray color
LINE_DIAG_DOWN - inra.ijpb.morphology.Strel.Shape: Diagonal line of a given length
LINE_DIAG_DOWN - inra.ijpb.morphology.Strel3D.Shape: Diagonal line of a given length
LINE_DIAG_UP - inra.ijpb.morphology.Strel.Shape: Diagonal line of a given length
LINE_DIAG_UP - inra.ijpb.morphology.Strel3D.Shape: Diagonal line of a given length
LINE_HORIZ - inra.ijpb.morphology.Strel.Shape: Horizontal line of a given length
LINE_HORIZ - inra.ijpb.morphology.Strel3D.Shape: Horizontal line of a given length
LINE_VERT - inra.ijpb.morphology.Strel.Shape: Vertical line of a given length
LINE_VERT - inra.ijpb.morphology.Strel3D.Shape: Vertical line of a given length
LINE_Z - inra.ijpb.morphology.Strel3D.Shape: 3D line in the Z direction
LinearDepthStrel3D - Class in inra.ijpb.morphology.strel: An horizontal linear structuring element of a given length.
LinearDepthStrel3D(int) - Constructor for class inra.ijpb.morphology.strel.LinearDepthStrel3D: Creates a new horizontal linear structuring element of a given size.
LinearDepthStrel3D(int, int) - Constructor for class inra.ijpb.morphology.strel.LinearDepthStrel3D: Creates a new horizontal linear structuring element of a given size and with a given offset.
LinearDiagDownStrel - Class in inra.ijpb.morphology.strel: A diagonal linear structuring element of a given length, with direction vector (+1,+1) in image coordinate system.
LinearDiagDownStrel(int) - Constructor for class inra.ijpb.morphology.strel.LinearDiagDownStrel: Creates a new diagonal linear structuring element of a given size.
LinearDiagDownStrel(int, int) - Constructor for class inra.ijpb.morphology.strel.LinearDiagDownStrel: Creates a new diagonal linear structuring element of a given size and with a given offset.
LinearDiagUpStrel - Class in inra.ijpb.morphology.strel: A diagonal linear structuring element of a given length, with direction vector (+1,-1) in image coordinate system.
LinearDiagUpStrel(int) - Constructor for class inra.ijpb.morphology.strel.LinearDiagUpStrel: Creates a new diagonal linear structuring element of a given size.
LinearDiagUpStrel(int, int) - Constructor for class inra.ijpb.morphology.strel.LinearDiagUpStrel: Creates a new diagonal linear structuring element of a given size and with a given offset.
LinearHorizontalStrel - Class in inra.ijpb.morphology.strel: An horizontal linear structuring element of a given length.
LinearHorizontalStrel(int) - Constructor for class inra.ijpb.morphology.strel.LinearHorizontalStrel: Creates a new horizontal linear structuring element of a given size.
LinearHorizontalStrel(int, int) - Constructor for class inra.ijpb.morphology.strel.LinearHorizontalStrel: Creates a new horizontal linear structuring element of a given size and with a given offset.
LinearVerticalStrel - Class in inra.ijpb.morphology.strel: A vertical linear structuring element of a given length.
LinearVerticalStrel(int) - Constructor for class inra.ijpb.morphology.strel.LinearVerticalStrel: Creates a new vertical linear structuring element of a given size.
LinearVerticalStrel(int, int) - Constructor for class inra.ijpb.morphology.strel.LinearVerticalStrel: Creates a new vertical linear structuring element of a given size and with a given offset.
LINES - inra.ijpb.plugins.InteractiveMarkerControlledWatershed.ResultMode: Display only watershed dams.
LINES - inra.ijpb.plugins.MorphologicalSegmentation.ResultMode: display mode showing only watershed lines in black over white background
LocalBufferedHistogram - Class in inra.ijpb.morphology.strel: Local histogram in a linear neighborhood of a pixel.
LocalBufferedHistogram(int) - Constructor for class inra.ijpb.morphology.strel.LocalBufferedHistogram: Main constructor.
LocalBufferedHistogram(int, int) - Constructor for class inra.ijpb.morphology.strel.LocalBufferedHistogram: Initializes an histogram filled with the given value.
LocalExtremum - Interface in inra.ijpb.morphology.strel: Computes the extremum in a local sliding neighborhood of the current pixel.
LocalExtremum.Type - Enum in inra.ijpb.morphology.strel: An enumeration of the types of possible extremum.
LocalExtremumBufferDouble - Class in inra.ijpb.morphology.strel: Computes the maximum in a local buffer around current point.
LocalExtremumBufferDouble(int) - Constructor for class inra.ijpb.morphology.strel.LocalExtremumBufferDouble: Main constructor.
LocalExtremumBufferDouble(int, double) - Constructor for class inra.ijpb.morphology.strel.LocalExtremumBufferDouble: Initializes an histogram filled with the given value.
LocalExtremumBufferDouble(int, LocalExtremum.Type) - Constructor for class inra.ijpb.morphology.strel.LocalExtremumBufferDouble: Constructor from size and type of extremum (minimum or maximum).
LocalExtremumBufferGray8 - Class in inra.ijpb.morphology.strel: Computes the maximum in a local buffer around current point.
LocalExtremumBufferGray8(int) - Constructor for class inra.ijpb.morphology.strel.LocalExtremumBufferGray8: Main constructor.
LocalExtremumBufferGray8(int, int) - Constructor for class inra.ijpb.morphology.strel.LocalExtremumBufferGray8: Initializes an histogram filled with the given value.
LocalExtremumBufferGray8(int, LocalExtremum.Type) - Constructor for class inra.ijpb.morphology.strel.LocalExtremumBufferGray8: Constructor from size and type of extremum (minimum or maximum).
longestGeodesicPaths() - Method in class inra.ijpb.binary.geodesic.GeodesicDiameterFloat: Deprecated.

Computes the geodesic path of each particle within the given label image.
longestGeodesicPaths() - Method in class inra.ijpb.binary.geodesic.GeodesicDiameterShort: Deprecated.

Computes the geodesic path of each particle within the given label image.
LT - inra.ijpb.plugins.LabelSizeFilteringPlugin.Operation: The operator for "lower than"
LT - Static variable in interface inra.ijpb.label.select.RelationalOperator: Implementation of the "Lower Than" operator.

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