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D

DARK_GRAY - inra.ijpb.color.CommonColors: The dark gray color
DARK_GRAY - inra.ijpb.util.CommonColors: Deprecated.

The dark gray color
debug - Static variable in class inra.ijpb.measure.GeometricMeasures2D: Deprecated.

option for debugging
debug - Variable in class inra.ijpb.plugins.AnalyzeRegions3D: When this options is set to true, information messages are displayed on the console, and the number of counts for each direction is included in results table.
debug - Variable in class inra.ijpb.plugins.CropLabelPlugin: When this options is set to true, information messages are displayed on the console.
debug - Variable in class inra.ijpb.plugins.MaxFeretDiameterPlugin: When this options is set to true, information messages are displayed on the console.
debug - Variable in class inra.ijpb.plugins.MicrostructureAnalysisPlugin: When this options is set to true, information messages are displayed on the console, and the number of counts for each direction is included in results table.
debug - Variable in class inra.ijpb.plugins.ParticleAnalysis3DPlugin: Deprecated.

When this options is set to true, information messages are displayed on the console, and the number of counts for each direction is included in results table.
debug - Variable in class inra.ijpb.plugins.RegionMorphometryPlugin: Deprecated.

When this options is set to true, information messages are displayed on the console, and the number of counts for each direction is included in results table.
debug - Variable in class inra.ijpb.plugins.SelectLabelsPlugin: When this options is set to true, information messages are displayed on the console, and the number of counts for each direction is included in results table.
decompose() - Method in class inra.ijpb.morphology.strel.CubeStrel: Returns a collection of three linear-shape structuring element, along each principal direction.
decompose() - Method in class inra.ijpb.morphology.strel.CuboidStrel: Returns a collection of three linear-shape structuring element, along each principal direction.
decompose() - Method in class inra.ijpb.morphology.strel.DiamondStrel
decompose() - Method in class inra.ijpb.morphology.strel.OctagonStrel: Returns a decomposition into four structuring elements, corresponding to horizontal, vertical, and diagonal linear structuring elements.
decompose() - Method in interface inra.ijpb.morphology.strel.SeparableStrel: Decompose this separable structuring element into a set of smaller structuring elements that can be used to accelerate processing.
decompose() - Method in interface inra.ijpb.morphology.strel.SeparableStrel3D: Decompose this separable structuring element into a set of smaller structuring elements that can be used to accelerate processing.
decompose() - Method in class inra.ijpb.morphology.strel.SquareStrel
DefaultAlgoListener - Class in inra.ijpb.algo: Utility class that catches algorithm events and displays them on ImageJ main Frame.
DefaultAlgoListener() - Constructor for class inra.ijpb.algo.DefaultAlgoListener
depth() - Method in class inra.ijpb.geometry.Box3D: Computes the depth of the bounding box, corresponding to the extent along the Z dimension.
dialogItemChanged(GenericDialog, AWTEvent) - Method in class inra.ijpb.plugins.AreaOpeningPlugin
dialogItemChanged(GenericDialog, AWTEvent) - Method in class inra.ijpb.plugins.ChamferDistanceMapPlugin: Called when a dialog widget has been modified: recomputes option values from dialog content.
dialogItemChanged(GenericDialog, AWTEvent) - Method in class inra.ijpb.plugins.DirectionalFilteringPlugin
dialogItemChanged(GenericDialog, AWTEvent) - Method in class inra.ijpb.plugins.DistanceTransformWatershed: Called when a dialog widget has been modified: recomputes option values from dialog content.
dialogItemChanged(GenericDialog, AWTEvent) - Method in class inra.ijpb.plugins.DrawTableValuesPlugin
dialogItemChanged(GenericDialog, AWTEvent) - Method in class inra.ijpb.plugins.ExtendedMinAndMaxPlugin
dialogItemChanged(GenericDialog, AWTEvent) - Method in class inra.ijpb.plugins.GrayscaleAreaOpeningPlugin
dialogItemChanged(GenericDialog, AWTEvent) - Method in class inra.ijpb.plugins.GrayscaleAttributeFilteringPlugin
dialogItemChanged(GenericDialog, AWTEvent) - Method in class inra.ijpb.plugins.GrayscaleBoxDiameterOpeningPlugin
dialogItemChanged(GenericDialog, AWTEvent) - Method in class inra.ijpb.plugins.InteractiveGeodesicDistanceMap: Called when a dialog widget has been modified: recomputes option values from dialog content.
dialogItemChanged(GenericDialog, AWTEvent) - Method in class inra.ijpb.plugins.InteractiveMorphologicalReconstruction: Called when a dialog widget has been modified: recomputes option values from dialog content.
dialogItemChanged(GenericDialog, AWTEvent) - Method in class inra.ijpb.plugins.LabelToValuePlugin
dialogItemChanged(GenericDialog, AWTEvent) - Method in class inra.ijpb.plugins.MorphologicalFilterPlugin
dialogItemChanged(GenericDialog, AWTEvent) - Method in class inra.ijpb.plugins.RegionalMinAndMaxPlugin
dialogItemChanged(GenericDialog, AWTEvent) - Method in class inra.ijpb.plugins.SetLabelMapPlugin
diameter - Variable in class inra.ijpb.geometry.AngleDiameterPair: Diameter computed in the direction of the angle
diameter - Variable in class inra.ijpb.measure.region2d.GeodesicDiameter.Result: The geodesic diameter of the region
diameter - Variable in class inra.ijpb.measure.region3d.GeodesicDiameter3D.Result: The geodesic diameter of the region
diameter() - Method in class inra.ijpb.geometry.PointPair2D
diameter() - Method in class inra.ijpb.geometry.PointPair3D
DIAMOND - inra.ijpb.morphology.Strel.Shape: Diamond of a given diameter
DIAMOND - inra.ijpb.morphology.Strel3D.Shape: Diamond of a given diameter
DiamondStrel - Class in inra.ijpb.morphology.strel: Structuring element representing a diamond of a given diameter.
DiamondStrel(int) - Constructor for class inra.ijpb.morphology.strel.DiamondStrel: Creates a new diamond structuring element of given diameter.
DiamondStrel(int, int) - Constructor for class inra.ijpb.morphology.strel.DiamondStrel: Creates a new diamond structuring element with a given diameter and offset.
dilateLabels(ImagePlus, double) - Static method in class inra.ijpb.label.LabelImages: Applies a constrained dilation to each region in the 3D label map: The dilation of each region is constrained by the other regions; The dilation extent is limited by the specified distance (in voxel unit)
dilateLabels(ImageStack, double) - Static method in class inra.ijpb.label.LabelImages: Applies a constrained dilation to each region in the 3D label map: The dilation of each region is constrained by the other regions; The dilation extent is limited by the the radius value (in voxel unit).
dilateLabels(ImageProcessor, double) - Static method in class inra.ijpb.label.LabelImages: Applies a constrained dilation to each region in the label map: The dilation of each region is constrained by the other regions; The dilation extent is given by a radius value (in pixel unit).
DilateLabelsPlugin - Class in inra.ijpb.plugins: Dilate all labels within a label image.
DilateLabelsPlugin() - Constructor for class inra.ijpb.plugins.DilateLabelsPlugin
dilation(ImagePlus, Strel3D) - Static method in class inra.ijpb.morphology.Morphology: Performs morphological dilation on the input image.
dilation(ImageStack) - Method in class inra.ijpb.morphology.strel.AbstractInPlaceStrel
dilation(ImageStack) - Method in class inra.ijpb.morphology.strel.AbstractInPlaceStrel3D
dilation(ImageStack) - Method in class inra.ijpb.morphology.strel.AbstractSeparableStrel3D
dilation(ImageStack) - Method in class inra.ijpb.morphology.strel.AbstractStrel
dilation(ImageStack) - Method in class inra.ijpb.morphology.strel.AbstractStrel3D: Implements a default algorithm for dilation, that consists in iterating over the neighbors of each pixel to compute the maximum value.
dilation(ImageStack) - Method in class inra.ijpb.morphology.strel.BallStrel: Performs dilation with a ball structuring element by calling the ImageJ Filters3D.filter method, using Filters3D.MAX option.
dilation(ImageStack) - Method in class inra.ijpb.morphology.strel.Cross3DStrel
dilation(ImageStack) - Method in class inra.ijpb.morphology.strel.EllipsoidStrel: Performs dilation with a ball structuring element by calling the ImageJ Filters3D.filter method, using Filters3D.MAX option.
dilation(ImageStack) - Method in class inra.ijpb.morphology.strel.ExtrudedStrel
dilation(ImageStack) - Method in interface inra.ijpb.morphology.Strel3D: Performs a morphological dilation of the input image with this structuring element, and returns the result in a new ImageStack.
dilation(ImageStack, Strel3D) - Static method in class inra.ijpb.morphology.Morphology: Performs morphological dilation on the input 3D image.
dilation(ImageProcessor) - Method in class inra.ijpb.morphology.directional.OrientedLineStrel
dilation(ImageProcessor) - Method in class inra.ijpb.morphology.strel.AbstractInPlaceStrel
dilation(ImageProcessor) - Method in class inra.ijpb.morphology.strel.AbstractSeparableStrel
dilation(ImageProcessor) - Method in class inra.ijpb.morphology.strel.AbstractStrel: Implements a default algorithm for dilation, that consists in iterating over the neighbors of each pixel to compute the maximum value.
dilation(ImageProcessor) - Method in interface inra.ijpb.morphology.Strel: Performs a morphological dilation of the input image with this structuring element, and returns the result in a new ImageProcessor.
dilation(ImageProcessor, Strel) - Static method in class inra.ijpb.morphology.Morphology: Performs morphological dilation on the input image.
Dilation - Class in inra.ijpb.morphology.filter: Performs morphological dilation on 2D/3D images.
Dilation(Strel3D) - Constructor for class inra.ijpb.morphology.filter.Dilation: Creates a new Morphological Dilation operator with the specified structuring element.
DILATION - inra.ijpb.morphology.directional.DirectionalFilter.Operation: The morphological dilation operation
DILATION - inra.ijpb.morphology.Morphology.Operation: Morphological dilation (local maxima)
DILATION - inra.ijpb.plugins.LabelMapMorphologicalFilteringPlugin.Operation: Morphological dilation (local maxima)
DirectionalFilter - Class in inra.ijpb.morphology.directional: Directional filtering of planar images.
DirectionalFilter(DirectionalFilter.Type, DirectionalFilter.Operation, int, int) - Constructor for class inra.ijpb.morphology.directional.DirectionalFilter: Creates new instance of directional filter using line structuring elements.
DirectionalFilter(DirectionalFilter.Type, DirectionalFilter.Operation, OrientedStrelFactory, int) - Constructor for class inra.ijpb.morphology.directional.DirectionalFilter: Creates new instance of directional filter for arbitrary structuring elements, by specifying the factory.
DirectionalFilter.Operation - Enum in inra.ijpb.morphology.directional: A pre-defined set of operations.
DirectionalFilter.Type - Enum in inra.ijpb.morphology.directional: Specifies how to combine the different orientations: min or max.
DirectionalFilteringPlugin - Class in inra.ijpb.plugins: Plugin for computing directional filtering.
DirectionalFilteringPlugin() - Constructor for class inra.ijpb.plugins.DirectionalFilteringPlugin
directionWeights3d13(Calibration) - Static method in class inra.ijpb.measure.region3d.IntrinsicVolumes3DUtils: Returns an array with seven values corresponding the unique direction vectors obtained with 13 directions.
directionWeights3d3(Calibration) - Static method in class inra.ijpb.measure.region3d.IntrinsicVolumes3DUtils: Returns an array with seven values corresponding the unique direction vectors obtained with 3 directions.
dirNumberLabels - Static variable in class inra.ijpb.plugins.MicrostructureAnalysisPlugin: List of available numbers of directions
dirNumberLabels - Static variable in class inra.ijpb.plugins.RegionMorphometryPlugin: Deprecated.

List of available numbers of directions
dirNumbers - Static variable in class inra.ijpb.plugins.MicrostructureAnalysisPlugin: Array of weights, in the same order than the array of names.
dirNumbers - Static variable in class inra.ijpb.plugins.RegionMorphometryPlugin: Deprecated.

Array of weights, in the same order than the array of names.
DISK - inra.ijpb.morphology.Strel.Shape: Disk of a given radius
DiskStrel - Class in inra.ijpb.morphology.strel: Disk structuring element.
distance(Point3D) - Method in class inra.ijpb.geometry.Point3D: Computes the euclidean distance to another point.
distance(Point2D) - Method in class inra.ijpb.geometry.StraightLine2D: Computes the distance between this line and a query point.
distanceMap(ImagePlus) - Static method in class inra.ijpb.binary.BinaryImages: Computes the distance map (or distance transform) from a binary image processor.
distanceMap(ImageStack) - Static method in class inra.ijpb.binary.BinaryImages: Computes the distance map from a binary 3D image.
distanceMap(ImageStack) - Method in class inra.ijpb.binary.distmap.ChamferDistanceTransform3DFloat: Computes the distance map from a 3D binary image.
distanceMap(ImageStack) - Method in class inra.ijpb.binary.distmap.ChamferDistanceTransform3DShort: Computes the distance map from a 3D binary image.
distanceMap(ImageStack) - Method in interface inra.ijpb.binary.distmap.DistanceTransform3D: Computes the distance map from a 3D binary image.
distanceMap(ImageStack) - Method in class inra.ijpb.binary.distmap.DistanceTransform3D4WeightsFloat: Deprecated.

Computes the distance map from a 3D binary image.
distanceMap(ImageStack) - Method in class inra.ijpb.binary.distmap.DistanceTransform3D4WeightsShort: Deprecated.

Computes the distance map from a 3D binary image.
distanceMap(ImageStack) - Method in class inra.ijpb.binary.distmap.DistanceTransform3DFloat: Deprecated.

Computes the distance map from a 3D binary image.
distanceMap(ImageStack) - Method in class inra.ijpb.binary.distmap.DistanceTransform3DShort: Deprecated.

Computes the distance map from a 3D binary image.
distanceMap(ImageStack) - Method in class inra.ijpb.label.distmap.ChamferDistanceTransform3DFloat: Computes the distance map from a 3D label image.
distanceMap(ImageStack) - Method in class inra.ijpb.label.distmap.ChamferDistanceTransform3DShort: Computes the distance map from a 3D binary image.
distanceMap(ImageStack) - Method in interface inra.ijpb.label.distmap.DistanceTransform3D: Computes the distance map from a 3D label image.
distanceMap(ImageStack) - Method in class inra.ijpb.label.distmap.DistanceTransform3DFloat: Deprecated.

Computes the distance map from a 3D binary image.
distanceMap(ImageStack) - Method in class inra.ijpb.label.distmap.DistanceTransform3DShort: Deprecated.

Computes the distance map from a 3D binary image.
distanceMap(ImageStack) - Static method in class inra.ijpb.label.LabelImages: Computes the 3D distance map from an image of labels.
distanceMap(ImageStack, float[], boolean) - Static method in class inra.ijpb.binary.BinaryImages: Computes the distance map from a binary 3D image.
distanceMap(ImageStack, float[], boolean) - Static method in class inra.ijpb.label.LabelImages: Computes the distance map from a 3D image of labels Distance is computed for each label voxel, as the chamfer distance to the nearest voxel with a different value.
distanceMap(ImageStack, short[], boolean) - Static method in class inra.ijpb.binary.BinaryImages: Computes the distance map from a binary 3D image.
distanceMap(ImageStack, short[], boolean) - Static method in class inra.ijpb.label.LabelImages: Computes the distance map from a 3D image of labels Distance is computed for each label voxel, as the chamfer distance to the nearest voxel with a different value.
distanceMap(ImageStack, ChamferMask3D, boolean, boolean) - Static method in class inra.ijpb.binary.BinaryImages: Computes the distance map from a binary 3D image.
distanceMap(ImageStack, ChamferMask3D, boolean, boolean) - Static method in class inra.ijpb.label.LabelImages: Computes the 3D distance map from an image of labels, by specifying the chamfer mask and the normalization.
distanceMap(ImageProcessor) - Static method in class inra.ijpb.binary.BinaryImages: Computes the distance map (or distance transform) from a binary image processor.
distanceMap(ImageProcessor) - Method in class inra.ijpb.binary.distmap.ChamferDistanceTransform2DFloat: Computes the distance map of the distance to the nearest background pixel.
distanceMap(ImageProcessor) - Method in class inra.ijpb.binary.distmap.ChamferDistanceTransform2DShort: Computes the distance map of the distance to the nearest background pixel.
distanceMap(ImageProcessor) - Method in interface inra.ijpb.binary.distmap.DistanceTransform: Computes the distance map from a binary image processor.
distanceMap(ImageProcessor) - Method in class inra.ijpb.binary.distmap.DistanceTransform3x3Float: Deprecated.

Computes the distance map of the distance to the nearest pixel with a different value.
distanceMap(ImageProcessor) - Method in class inra.ijpb.binary.distmap.DistanceTransform3x3Short: Deprecated.

Computes the distance map of the distance to the nearest pixel with a different value.
distanceMap(ImageProcessor) - Method in class inra.ijpb.binary.distmap.DistanceTransform5x5Float: Deprecated.

Computes the distance map of the distance to the nearest pixel with a different value.
distanceMap(ImageProcessor) - Method in class inra.ijpb.binary.distmap.DistanceTransform5x5Short: Deprecated.

Computes the distance map of the distance to the nearest pixel with a different value.
distanceMap(ImageProcessor) - Method in class inra.ijpb.label.distmap.ChamferDistanceTransform2DFloat: Computes the distance map of the distance to the nearest pixel with a different value.
distanceMap(ImageProcessor) - Method in class inra.ijpb.label.distmap.ChamferDistanceTransform2DShort: Computes the distance map of the distance to the nearest pixel with a different value.
distanceMap(ImageProcessor) - Method in interface inra.ijpb.label.distmap.DistanceTransform2D: Computes the distance map from a label image.
distanceMap(ImageProcessor) - Static method in class inra.ijpb.label.LabelImages: Computes the distance map for each region within a label map.
distanceMap(ImageProcessor, float[], boolean) - Static method in class inra.ijpb.binary.BinaryImages: Computes the distance map from a binary image processor, by specifying weights and normalization.
distanceMap(ImageProcessor, float[], boolean) - Static method in class inra.ijpb.label.LabelImages: Computes the distance map from a 3D image of labels Distance is computed for each label voxel, as the chamfer distance to the nearest voxel with a different value.
distanceMap(ImageProcessor, short[], boolean) - Static method in class inra.ijpb.binary.BinaryImages: Computes the distance map from a binary image processor, by specifying weights and normalization.
distanceMap(ImageProcessor, short[], boolean) - Static method in class inra.ijpb.label.LabelImages: Computes the distance map for each region within a label map.
distanceMap(ImageProcessor, ChamferMask2D, boolean, boolean) - Static method in class inra.ijpb.binary.BinaryImages: Computes the distance map from a binary image processor, by specifying weights and normalization.
distanceMap(ImageProcessor, ChamferMask2D, boolean, boolean) - Static method in class inra.ijpb.label.LabelImages: Computes the distance map for each region within a label map, by specifying the chamfer mask and the normalization.
DistanceTransform - Interface in inra.ijpb.binary.distmap: Interface for computing distance maps from binary images.
DistanceTransform2D - Interface in inra.ijpb.label.distmap: Interface for computing distance maps for 2D label images.
DistanceTransform3D - Interface in inra.ijpb.binary.distmap: Interface for computing distance maps from binary 3D images.
DistanceTransform3D - Interface in inra.ijpb.label.distmap: Interface for computing distance maps for 3D label images.
DistanceTransform3D4WeightsFloat - Class in inra.ijpb.binary.distmap: Deprecated.
replaced by ChamferDistanceTransform3DFloat (since 1.5.0)
DistanceTransform3D4WeightsFloat(float[]) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform3D4WeightsFloat: Deprecated.

Default constructor that specifies the chamfer weights.
DistanceTransform3D4WeightsFloat(float[], boolean) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform3D4WeightsFloat: Deprecated.

Constructor specifying the chamfer weights and the optional normalization.
DistanceTransform3D4WeightsFloat(ChamferWeights3D) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform3D4WeightsFloat: Deprecated.

Default constructor that specifies the chamfer weights.
DistanceTransform3D4WeightsFloat(ChamferWeights3D, boolean) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform3D4WeightsFloat: Deprecated.

Constructor specifying the chamfer weights and the optional normalization.
DistanceTransform3D4WeightsShort - Class in inra.ijpb.binary.distmap: Deprecated.
replaced by ChamferDistanceTransform3DShort (since 1.5.0)
DistanceTransform3D4WeightsShort(short[]) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform3D4WeightsShort: Deprecated.

Default constructor that specifies the chamfer weights.
DistanceTransform3D4WeightsShort(short[], boolean) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform3D4WeightsShort: Deprecated.

Constructor specifying the chamfer weights and the optional normalization.
DistanceTransform3D4WeightsShort(ChamferWeights3D) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform3D4WeightsShort: Deprecated.

Default constructor that specifies the chamfer weights.
DistanceTransform3D4WeightsShort(ChamferWeights3D, boolean) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform3D4WeightsShort: Deprecated.

Constructor specifying the chamfer weights and the optional normalization.
DistanceTransform3DFloat - Class in inra.ijpb.binary.distmap: Deprecated.
replaced by ChamferDistanceTransform3DFloat (since 1.5.0)
DistanceTransform3DFloat - Class in inra.ijpb.label.distmap: Deprecated.
replaced by ChamferDistanceTransform3DFloat (since 1.4.4)
DistanceTransform3DFloat(float[]) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform3DFloat: Deprecated.

Default constructor that specifies the chamfer weights.
DistanceTransform3DFloat(float[]) - Constructor for class inra.ijpb.label.distmap.DistanceTransform3DFloat: Deprecated.

Default constructor that specifies the chamfer weights.
DistanceTransform3DFloat(float[], boolean) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform3DFloat: Deprecated.

Constructor specifying the chamfer weights and the optional normalization.
DistanceTransform3DFloat(float[], boolean) - Constructor for class inra.ijpb.label.distmap.DistanceTransform3DFloat: Deprecated.

Constructor specifying the chamfer weights and the optional normalization.
DistanceTransform3DFloat(ChamferWeights3D) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform3DFloat: Deprecated.

Default constructor that specifies the chamfer weights.
DistanceTransform3DFloat(ChamferWeights3D) - Constructor for class inra.ijpb.label.distmap.DistanceTransform3DFloat: Deprecated.

Default constructor that specifies the chamfer weights.
DistanceTransform3DFloat(ChamferWeights3D, boolean) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform3DFloat: Deprecated.

Constructor specifying the chamfer weights and the optional normalization.
DistanceTransform3DFloat(ChamferWeights3D, boolean) - Constructor for class inra.ijpb.label.distmap.DistanceTransform3DFloat: Deprecated.

Constructor specifying the chamfer weights and the optional normalization.
DistanceTransform3DShort - Class in inra.ijpb.binary.distmap: Deprecated.
replaced by ChamferDistanceTransform3DShort (since 1.5.0)
DistanceTransform3DShort - Class in inra.ijpb.label.distmap: Deprecated.
replaced by ChamferDistanceTransform3DShort (since 1.4.4)
DistanceTransform3DShort(short[]) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform3DShort: Deprecated.

Default constructor that specifies the chamfer weights.
DistanceTransform3DShort(short[]) - Constructor for class inra.ijpb.label.distmap.DistanceTransform3DShort: Deprecated.

Default constructor that specifies the chamfer weights.
DistanceTransform3DShort(short[], boolean) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform3DShort: Deprecated.

Constructor specifying the chamfer weights and the optional normalization.
DistanceTransform3DShort(short[], boolean) - Constructor for class inra.ijpb.label.distmap.DistanceTransform3DShort: Deprecated.

Constructor specifying the chamfer weights and the optional normalization.
DistanceTransform3DShort(ChamferWeights3D) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform3DShort: Deprecated.

Default constructor that specifies the chamfer weights.
DistanceTransform3DShort(ChamferWeights3D) - Constructor for class inra.ijpb.label.distmap.DistanceTransform3DShort: Deprecated.

Default constructor that specifies the chamfer weights.
DistanceTransform3DShort(ChamferWeights3D, boolean) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform3DShort: Deprecated.

Constructor specifying the chamfer weights and the optional normalization.
DistanceTransform3DShort(ChamferWeights3D, boolean) - Constructor for class inra.ijpb.label.distmap.DistanceTransform3DShort: Deprecated.

Constructor specifying the chamfer weights and the optional normalization.
DistanceTransform3x3Float - Class in inra.ijpb.binary.distmap: Deprecated.
replaced by ChamferDistanceTransform2DFloat (since 1.5.0)
DistanceTransform3x3Float(float[]) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform3x3Float: Deprecated.

Default constructor that specifies the chamfer weights.
DistanceTransform3x3Float(float[], boolean) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform3x3Float: Deprecated.

Constructor specifying the chamfer weights and the optional normalization.
DistanceTransform3x3Float(ChamferWeights, boolean) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform3x3Float: Deprecated.

Constructor specifying the chamfer weights and the optional normalization.
DistanceTransform3x3Short - Class in inra.ijpb.binary.distmap: Deprecated.
replaced by ChamferDistanceTransform2DShort (since 1.5.0)
DistanceTransform3x3Short(short[]) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform3x3Short: Deprecated.

Default constructor that specifies the chamfer weights.
DistanceTransform3x3Short(short[], boolean) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform3x3Short: Deprecated.

Constructor specifying the chamfer weights and the optional normalization.
DistanceTransform3x3Short(ChamferWeights, boolean) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform3x3Short: Deprecated.

Constructor specifying the chamfer weights and the optional normalization.
DistanceTransform5x5Float - Class in inra.ijpb.binary.distmap: Deprecated.
replaced by ChamferDistanceTransform2DFloat (since 1.5.0)
DistanceTransform5x5Float() - Constructor for class inra.ijpb.binary.distmap.DistanceTransform5x5Float: Deprecated.

Default constructor with predefined chamfer weights.
DistanceTransform5x5Float(float[]) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform5x5Float: Deprecated.

Default constructor that specifies the chamfer weights.
DistanceTransform5x5Float(float[], boolean) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform5x5Float: Deprecated.

Constructor specifying the chamfer weights and the optional normalization.
DistanceTransform5x5Float(ChamferWeights) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform5x5Float: Deprecated.

Constructor specifying the chamfer weights and the optional normalization.
DistanceTransform5x5Float(ChamferWeights, boolean) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform5x5Float: Deprecated.

Constructor specifying the chamfer weights and the optional normalization.
DistanceTransform5x5Short - Class in inra.ijpb.binary.distmap: Deprecated.
replaced by ChamferDistanceTransform2DShort (since 1.5.0)
DistanceTransform5x5Short() - Constructor for class inra.ijpb.binary.distmap.DistanceTransform5x5Short: Deprecated.

Default constructor with predefined chamfer weights.
DistanceTransform5x5Short(short[]) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform5x5Short: Deprecated.

Default constructor that specifies the chamfer weights.
DistanceTransform5x5Short(short[], boolean) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform5x5Short: Deprecated.

Constructor specifying the chamfer weights and the optional normalization.
DistanceTransform5x5Short(ChamferWeights) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform5x5Short: Deprecated.

Constructor specifying the chamfer weights and the optional normalization.
DistanceTransform5x5Short(ChamferWeights, boolean) - Constructor for class inra.ijpb.binary.distmap.DistanceTransform5x5Short: Deprecated.

Constructor specifying the chamfer weights and the optional normalization.
DistanceTransformWatershed - Class in inra.ijpb.plugins: This plugin computes watershed on the inverse of the distance map of a binary image.
DistanceTransformWatershed() - Constructor for class inra.ijpb.plugins.DistanceTransformWatershed
DistanceTransformWatershed3D - Class in inra.ijpb.plugins: This plugin computes watershed on the inverse of the distance map of a 3D binary image.
DistanceTransformWatershed3D() - Constructor for class inra.ijpb.plugins.DistanceTransformWatershed3D
DIVIDES - Static variable in interface inra.ijpb.math.ImageCalculator.Operation: Divides operator, that divides the values of the two images
dotProduct(Vector2D, Vector2D) - Static method in class inra.ijpb.geometry.Vector2D: Computes the dot product of two vectors, defined by:
dotProduct(Vector3D, Vector3D) - Static method in class inra.ijpb.geometry.Vector3D: Computes the dot product of two vectors, defined by:
dotProduct(Vector3d, Vector3d) - Static method in class inra.ijpb.measure.Vector3d: Deprecated.

Computes the dot product of two vectors, defined by:
drawDiameters(ImagePlus, Map<Integer, PointPair2D>) - Method in class inra.ijpb.plugins.MaxFeretDiameterPlugin: Draws the diameters on a target image.
DrawLabelsAsOverlayPlugin - Class in inra.ijpb.plugins: Draw the labels of the regions as overlay.
DrawLabelsAsOverlayPlugin() - Constructor for class inra.ijpb.plugins.DrawLabelsAsOverlayPlugin
drawPaths(ImagePlus, Map<Integer, GeodesicDiameter.Result>) - Method in class inra.ijpb.plugins.GeodesicDiameterPlugin: Displays the geodesic paths onto the given image.
DrawTableValuesPlugin - Class in inra.ijpb.plugins: Draw the values of a results table column into current image, using specified columns for x and y positions.
DrawTableValuesPlugin() - Constructor for class inra.ijpb.plugins.DrawTableValuesPlugin
drawValues(ImagePlus) - Method in class inra.ijpb.plugins.DrawTableValuesPlugin: Draw the values onto the target image.
dx - Variable in class inra.ijpb.binary.ChamferWeights3D.FloatOffset: Deprecated.

the offset along the X-axis
dx - Variable in class inra.ijpb.binary.ChamferWeights3D.ShortOffset: Deprecated.

the offset along the X-axis
dx - Variable in class inra.ijpb.binary.distmap.ChamferMask2D.FloatOffset: The offset along the X-axis
dx - Variable in class inra.ijpb.binary.distmap.ChamferMask2D.ShortOffset: The offset along the X-axis
dx - Variable in class inra.ijpb.binary.distmap.ChamferMask3D.FloatOffset: the offset along the X-axis
dx - Variable in class inra.ijpb.binary.distmap.ChamferMask3D.ShortOffset: the offset along the X-axis
dy - Variable in class inra.ijpb.binary.ChamferWeights3D.FloatOffset: Deprecated.

the offset along the Y-axis
dy - Variable in class inra.ijpb.binary.ChamferWeights3D.ShortOffset: Deprecated.

the offset along the Y-axis
dy - Variable in class inra.ijpb.binary.distmap.ChamferMask2D.FloatOffset: The offset along the Y-axis
dy - Variable in class inra.ijpb.binary.distmap.ChamferMask2D.ShortOffset: The offset along the Y-axis
dy - Variable in class inra.ijpb.binary.distmap.ChamferMask3D.FloatOffset: the offset along the Y-axis
dy - Variable in class inra.ijpb.binary.distmap.ChamferMask3D.ShortOffset: the offset along the Y-axis
dz - Variable in class inra.ijpb.binary.ChamferWeights3D.FloatOffset: Deprecated.

the offset along the Z-axis
dz - Variable in class inra.ijpb.binary.ChamferWeights3D.ShortOffset: Deprecated.

the offset along the Z-axis
dz - Variable in class inra.ijpb.binary.distmap.ChamferMask3D.FloatOffset: the offset along the Z-axis
dz - Variable in class inra.ijpb.binary.distmap.ChamferMask3D.ShortOffset: the offset along the Z-axis

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