G-Index

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G

GE - inra.ijpb.plugins.LabelSizeFilteringPlugin.Operation: The operator for "greater than or equal"
GE - Static variable in interface inra.ijpb.label.select.RelationalOperator: Implementation of the "Greater Than Or Equal" operator.
geodesicDiameter - Variable in class inra.ijpb.plugins.AnalyzeRegions.Features: The boolean flag for computing geodesic diameter.
GeodesicDiameter - Class in inra.ijpb.measure.region2d: Computes geodesic diameter of a set of labeled particles or regions, using an inner instance of GeodesicDistanceTransform for propagating chamfer distances.
GeodesicDiameter - Interface in inra.ijpb.binary.geodesic: Deprecated.
since 1.3.5, use inra.ijpb.measure.region2d.GeodesicDiameter instead
GeodesicDiameter() - Constructor for class inra.ijpb.measure.region2d.GeodesicDiameter: Empty constructor with default settings.
GeodesicDiameter(float[]) - Constructor for class inra.ijpb.measure.region2d.GeodesicDiameter: Deprecated.
GeodesicDiameter(ChamferWeights) - Constructor for class inra.ijpb.measure.region2d.GeodesicDiameter: Deprecated.
ChamferWeights is replaced by ChamferMask2D (since 1.4.4)
GeodesicDiameter(ChamferMask2D) - Constructor for class inra.ijpb.measure.region2d.GeodesicDiameter: Creates a new geodesic diameter computation operator.
GeodesicDiameter(GeodesicDistanceTransform) - Constructor for class inra.ijpb.measure.region2d.GeodesicDiameter: Creates a new geodesic diameter computation operator.
GeodesicDiameter.Result - Class in inra.ijpb.measure.region2d: Inner class used for representing results of geodesic diameters computations.
GeodesicDiameter3D - Class in inra.ijpb.measure.region3d: Computes the 3D geodesic diameters of regions within a 3D binary or label images using floating point computation for propagating distances.
GeodesicDiameter3D - Interface in inra.ijpb.binary.geodesic: Deprecated.
since 1.3.5, use inra.ijpb.measure.region3d.GeodesicDiameter3D instead
GeodesicDiameter3D(ChamferMask3D) - Constructor for class inra.ijpb.measure.region3d.GeodesicDiameter3D: Creates a new 3D geodesic diameter computation operator.
GeodesicDiameter3D.Result - Class in inra.ijpb.measure.region3d: Inner class used for representing results of 3D geodesic diameters computations.
GeodesicDiameter3DFloat - Class in inra.ijpb.binary.geodesic: Deprecated.
replaced by inra.ijpb.measure.region3d.GeodesicDiameter3D
GeodesicDiameter3DFloat(float[]) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDiameter3DFloat: Deprecated.

Creates a new 3D geodesic diameter computation operator.
GeodesicDiameter3DFloat(ChamferWeights3D) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDiameter3DFloat: Deprecated.
new uses ChamferMask3D (since 1.4.4)
GeodesicDiameter3DFloat(ChamferMask3D) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDiameter3DFloat: Deprecated.

Creates a new 3D geodesic diameter computation operator.
GeodesicDiameter3DPlugin - Class in inra.ijpb.plugins: Plugin for computing geodesic distances of 3D particles from label images using chamfer weights.
GeodesicDiameter3DPlugin() - Constructor for class inra.ijpb.plugins.GeodesicDiameter3DPlugin
GeodesicDiameterFloat - Class in inra.ijpb.binary.geodesic: Deprecated.
since 1.3.5, use inra.ijpb.measure.region2d.GeodesicDiameter instead
GeodesicDiameterFloat(float[]) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDiameterFloat: Deprecated.

Creates a new geodesic diameter computation operator.
GeodesicDiameterFloat(ChamferWeights) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDiameterFloat: Deprecated.

Creates a new geodesic diameter computation operator.
GeodesicDiameterPlugin - Class in inra.ijpb.plugins: Plugin for computing geodesic distances of labeled particles using chamfer weights.
GeodesicDiameterPlugin() - Constructor for class inra.ijpb.plugins.GeodesicDiameterPlugin
geodesicDiameters(ImageProcessor, int[], Calibration) - Static method in class inra.ijpb.measure.region2d.GeodesicDiameter: Computes the geodesic diameter of each region within the given label image.
GeodesicDiameterShort - Class in inra.ijpb.binary.geodesic: Deprecated.
since 1.3.5, use inra.ijpb.measure.region2d.GeodesicDiameter instead
GeodesicDiameterShort(short[]) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDiameterShort: Deprecated.

Creates a new geodesic diameter computation operator.
GeodesicDiameterShort(ChamferWeights) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDiameterShort: Deprecated.

Creates a new geodesic diameter computation operator.
geodesicDistanceMap(ImagePlus, ImagePlus) - Static method in class inra.ijpb.binary.BinaryImages: Computes the geodesic distance transform (or geodesic distance map) of a binary image of marker, constrained to a binary mask.
geodesicDistanceMap(ImageStack, ImageStack) - Method in interface inra.ijpb.binary.geodesic.GeodesicDistanceTransform3D: Computes 3D geodesic distance transform (or geodesic distance map) of a binary image of marker, constrained to a binary mask.
geodesicDistanceMap(ImageStack, ImageStack) - Method in class inra.ijpb.binary.geodesic.GeodesicDistanceTransform3DFloat
geodesicDistanceMap(ImageProcessor, ImageProcessor) - Static method in class inra.ijpb.binary.BinaryImages: Computes the geodesic distance transform (or geodesic distance map) of a binary image of marker, constrained to a binary mask.
geodesicDistanceMap(ImageProcessor, ImageProcessor) - Method in interface inra.ijpb.binary.geodesic.GeodesicDistanceTransform: Computes the geodesic distance transform (or geodesic distance map) of a binary image of marker, constrained to a binary mask.
geodesicDistanceMap(ImageProcessor, ImageProcessor) - Method in class inra.ijpb.binary.geodesic.GeodesicDistanceTransformFloat: Computes the geodesic distance function for each pixel in mask label image, using the given binary marker image.
geodesicDistanceMap(ImageProcessor, ImageProcessor) - Method in class inra.ijpb.binary.geodesic.GeodesicDistanceTransformFloat5x5: Deprecated.

Computes the geodesic distance function for each pixel in mask label image, using the given binary marker image.
geodesicDistanceMap(ImageProcessor, ImageProcessor) - Method in class inra.ijpb.binary.geodesic.GeodesicDistanceTransformFloatHybrid: Computes the geodesic distance function for each pixel in mask label image, using the given binary marker image.
geodesicDistanceMap(ImageProcessor, ImageProcessor) - Method in class inra.ijpb.binary.geodesic.GeodesicDistanceTransformShort: Computes the geodesic distance function for each pixel in mask label image, using the given binary marker image.
geodesicDistanceMap(ImageProcessor, ImageProcessor) - Method in class inra.ijpb.binary.geodesic.GeodesicDistanceTransformShort5x5: Deprecated.

Computes the geodesic distance function for each pixel in mask label image, using the given binary marker image.
geodesicDistanceMap(ImageProcessor, ImageProcessor) - Method in class inra.ijpb.binary.geodesic.GeodesicDistanceTransformShortHybrid: Computes the geodesic distance function for each pixel in mask label image, using the given binary marker image.
geodesicDistanceMap(ImageProcessor, ImageProcessor, float[], boolean) - Static method in class inra.ijpb.binary.BinaryImages: Computes the geodesic distance transform (or geodesic distance map) of a binary image of marker, constrained to a binary mask.
geodesicDistanceMap(ImageProcessor, ImageProcessor, short[], boolean) - Static method in class inra.ijpb.binary.BinaryImages: Computes the geodesic distance transform (or geodesic distance map) of a binary image of marker, constrained to a binary mask.
GeodesicDistanceMap3D - Class in inra.ijpb.plugins: Deprecated.
use GeodesicDistanceMap3DPlugin instead
GeodesicDistanceMap3D() - Constructor for class inra.ijpb.plugins.GeodesicDistanceMap3D: Deprecated.
GeodesicDistanceMap3DPlugin - Class in inra.ijpb.plugins: Plugin for computing geodesic distance map from binary 3D images using chamfer weights.
GeodesicDistanceMap3DPlugin() - Constructor for class inra.ijpb.plugins.GeodesicDistanceMap3DPlugin
GeodesicDistanceMapPlugin - Class in inra.ijpb.plugins: Plugin for computing geodesic distance map from binary marker and constrained to binary or label images using chamfer distances propagation.
GeodesicDistanceMapPlugin() - Constructor for class inra.ijpb.plugins.GeodesicDistanceMapPlugin
GeodesicDistanceTransform - Interface in inra.ijpb.binary.geodesic: Interface for computing Geodesic distance transforms (or geodesic distance maps) from binary images.
GeodesicDistanceTransform3D - Interface in inra.ijpb.binary.geodesic: Interface for computing Geodesic distance transforms (or geodesic distance maps) from binary images.
GeodesicDistanceTransform3DFloat - Class in inra.ijpb.binary.geodesic: Computation of geodesic distance transform for 3D images, using floating point computation.
GeodesicDistanceTransform3DFloat(float[]) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDistanceTransform3DFloat: Deprecated.
GeodesicDistanceTransform3DFloat(float[], boolean) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDistanceTransform3DFloat: Deprecated.
GeodesicDistanceTransform3DFloat(ChamferWeights3D, boolean) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDistanceTransform3DFloat: Deprecated.
GeodesicDistanceTransform3DFloat(ChamferMask3D, boolean) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDistanceTransform3DFloat: Creates a new algorithm for propagating geodesic distances.
GeodesicDistanceTransformFloat - Class in inra.ijpb.binary.geodesic: Computation of Chamfer geodesic distances using floating point array for storing result.
GeodesicDistanceTransformFloat(float[]) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDistanceTransformFloat: Deprecated.
GeodesicDistanceTransformFloat(float[], boolean) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDistanceTransformFloat: Deprecated.
GeodesicDistanceTransformFloat(ChamferMask2D) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDistanceTransformFloat: Creates a new algorithm for propagating geodesic distances.
GeodesicDistanceTransformFloat(ChamferMask2D, boolean) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDistanceTransformFloat: Creates a new algorithm for propagating geodesic distances.
GeodesicDistanceTransformFloat5x5 - Class in inra.ijpb.binary.geodesic: Deprecated.
replaced by GeodesicDistanceTransformFloat (since 1.4.4)
GeodesicDistanceTransformFloat5x5() - Constructor for class inra.ijpb.binary.geodesic.GeodesicDistanceTransformFloat5x5: Deprecated.

Creates a new algorithm for propagating geodesic distances.
GeodesicDistanceTransformFloat5x5(float[]) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDistanceTransformFloat5x5: Deprecated.

Creates a new algorithm for propagating geodesic distances.
GeodesicDistanceTransformFloat5x5(float[], boolean) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDistanceTransformFloat5x5: Deprecated.

Creates a new algorithm for propagating geodesic distances.
GeodesicDistanceTransformFloat5x5(ChamferWeights, boolean) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDistanceTransformFloat5x5: Deprecated.

Creates a new algorithm for propagating geodesic distances.
GeodesicDistanceTransformFloatHybrid - Class in inra.ijpb.binary.geodesic: Computation of geodesic distances based on a chamfer mask using floating point array for storing result.
GeodesicDistanceTransformFloatHybrid(ChamferMask2D) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDistanceTransformFloatHybrid: Creates a new algorithm for propagating geodesic distances.
GeodesicDistanceTransformFloatHybrid(ChamferMask2D, boolean) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDistanceTransformFloatHybrid: Creates a new algorithm for propagating geodesic distances.
GeodesicDistanceTransformShort - Class in inra.ijpb.binary.geodesic: Computation of geodesic distances based on a chamfer mask using short integer array for storing result.
GeodesicDistanceTransformShort(short[]) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDistanceTransformShort: Deprecated.
should use an instance of ChamferMask2D at construction
GeodesicDistanceTransformShort(short[], boolean) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDistanceTransformShort: Deprecated.
should use an instance of ChamferMask2D at construction
GeodesicDistanceTransformShort(ChamferMask2D) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDistanceTransformShort: Creates a new algorithm for propagating geodesic distances.
GeodesicDistanceTransformShort(ChamferMask2D, boolean) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDistanceTransformShort: Creates a new algorithm for propagating geodesic distances.
GeodesicDistanceTransformShort5x5 - Class in inra.ijpb.binary.geodesic: Deprecated.
replaced by GeodesicDistanceTransformShort (since 1.5.0)
GeodesicDistanceTransformShort5x5(short[]) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDistanceTransformShort5x5: Deprecated.

Creates a new algorithm for propagating geodesic distances.
GeodesicDistanceTransformShort5x5(short[], boolean) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDistanceTransformShort5x5: Deprecated.

Creates a new algorithm for propagating geodesic distances.
GeodesicDistanceTransformShort5x5(ChamferWeights, boolean) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDistanceTransformShort5x5: Deprecated.

Creates a new algorithm for propagating geodesic distances.
GeodesicDistanceTransformShortHybrid - Class in inra.ijpb.binary.geodesic: Computation of geodesic distances based on a chamfer mask using short integer array for storing result.
GeodesicDistanceTransformShortHybrid(ChamferMask2D) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDistanceTransformShortHybrid: Creates a new algorithm for propagating geodesic distances.
GeodesicDistanceTransformShortHybrid(ChamferMask2D, boolean) - Constructor for class inra.ijpb.binary.geodesic.GeodesicDistanceTransformShortHybrid: Creates a new algorithm for propagating geodesic distances.
geodesicElongation - Variable in class inra.ijpb.plugins.AnalyzeRegions.Features: The boolean flag for computing geodesic elongation.
GeodesicReconstruction - Class in inra.ijpb.morphology: Deprecated.
replaced by the Reconstruction class (2017.07.25)
GeodesicReconstruction3D - Class in inra.ijpb.morphology: Deprecated.
replaced by the Reconstruction class (2017.07.25)
GeodesicReconstruction3DAlgo - Interface in inra.ijpb.morphology.geodrec: Defines the interface for geodesic reconstruction algorithms applied to 3D stack images.
GeodesicReconstruction3DAlgoStub - Class in inra.ijpb.morphology.geodrec: Implementation basis for geodesic reconstruction algorithms for 3D images.
GeodesicReconstruction3DAlgoStub() - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstruction3DAlgoStub
GeodesicReconstruction3DHybrid0Float - Class in inra.ijpb.morphology.geodrec: Geodesic reconstruction for 3D stacks of floats, using hybrid algorithm.
GeodesicReconstruction3DHybrid0Float() - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstruction3DHybrid0Float: Creates a new instance of geodesic reconstruction by dilation algorithm, using the default connectivity 6.
GeodesicReconstruction3DHybrid0Float(int) - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstruction3DHybrid0Float: Creates a new instance of geodesic reconstruction by dilation algorithm, that specifies the connectivity to use.
GeodesicReconstruction3DHybrid0Float(GeodesicReconstructionType) - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstruction3DHybrid0Float: Creates a new instance of geodesic reconstruction by dilation algorithm, that specifies the type of reconstruction, and using the connectivity 6.
GeodesicReconstruction3DHybrid0Float(GeodesicReconstructionType, int) - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstruction3DHybrid0Float: Creates a new instance of geodesic reconstruction by dilation algorithm, that specifies the type of reconstruction, and the connectivity to use.
GeodesicReconstruction3DHybrid0Gray16 - Class in inra.ijpb.morphology.geodrec: Geodesic reconstruction for 3D stacks of shorts, using hybrid algorithm.
GeodesicReconstruction3DHybrid0Gray16() - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstruction3DHybrid0Gray16: Creates a new instance of geodesic reconstruction by dilation algorithm, using the default connectivity 6.
GeodesicReconstruction3DHybrid0Gray16(int) - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstruction3DHybrid0Gray16: Creates a new instance of geodesic reconstruction by dilation algorithm, that specifies the connectivity to use.
GeodesicReconstruction3DHybrid0Gray16(GeodesicReconstructionType) - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstruction3DHybrid0Gray16: Creates a new instance of geodesic reconstruction by dilation algorithm, that specifies the type of reconstruction, and using the connectivity 6.
GeodesicReconstruction3DHybrid0Gray16(GeodesicReconstructionType, int) - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstruction3DHybrid0Gray16: Creates a new instance of geodesic reconstruction by dilation algorithm, that specifies the type of reconstruction, and the connectivity to use.
GeodesicReconstruction3DHybrid0Gray8 - Class in inra.ijpb.morphology.geodrec: Geodesic reconstruction for 3D stacks of bytes, using hybrid algorithm.
GeodesicReconstruction3DHybrid0Gray8() - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstruction3DHybrid0Gray8: Creates a new instance of geodesic reconstruction by dilation algorithm, using the default connectivity 6.
GeodesicReconstruction3DHybrid0Gray8(int) - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstruction3DHybrid0Gray8: Creates a new instance of geodesic reconstruction by dilation algorithm, that specifies the connectivity to use.
GeodesicReconstruction3DHybrid0Gray8(GeodesicReconstructionType) - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstruction3DHybrid0Gray8: Creates a new instance of geodesic reconstruction by dilation algorithm, that specifies the type of reconstruction, and using the connectivity 6.
GeodesicReconstruction3DHybrid0Gray8(GeodesicReconstructionType, int) - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstruction3DHybrid0Gray8: Creates a new instance of geodesic reconstruction by dilation algorithm, that specifies the type of reconstruction, and the connectivity to use.
GeodesicReconstruction3DHybrid1Image3D - Class in inra.ijpb.morphology.geodrec: Geodesic reconstruction for 3D stacks of any type, using hybrid algorithm and Image3D access class.
GeodesicReconstruction3DHybrid1Image3D() - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstruction3DHybrid1Image3D: Creates a new instance of geodesic reconstruction by dilation algorithm, using the default connectivity 6.
GeodesicReconstruction3DHybrid1Image3D(int) - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstruction3DHybrid1Image3D: Creates a new instance of geodesic reconstruction by dilation algorithm, that specifies the connectivity to use.
GeodesicReconstruction3DHybrid1Image3D(GeodesicReconstructionType) - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstruction3DHybrid1Image3D: Creates a new instance of geodesic reconstruction by dilation algorithm, that specifies the type of reconstruction, and using the connectivity 6.
GeodesicReconstruction3DHybrid1Image3D(GeodesicReconstructionType, int) - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstruction3DHybrid1Image3D: Creates a new instance of geodesic reconstruction by dilation algorithm, that specifies the type of reconstruction, and the connectivity to use.
GeodesicReconstructionAlgo - Interface in inra.ijpb.morphology.geodrec: Defines the interface for geodesic reconstructions algorithms applied to planar images.
GeodesicReconstructionAlgoStub - Class in inra.ijpb.morphology.geodrec: Implementation basis for geodesic reconstruction algorithms for planar images.
GeodesicReconstructionAlgoStub() - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstructionAlgoStub
GeodesicReconstructionByDilation - Class in inra.ijpb.morphology.geodrec: Geodesic reconstruction by dilation for planar images.
GeodesicReconstructionByDilation() - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstructionByDilation: Creates a new instance of geodesic reconstruction by dilation algorithm, using the default connectivity 4.
GeodesicReconstructionByDilation(int) - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstructionByDilation: Creates a new instance of geodesic reconstruction by dilation algorithm, that specifies the connectivity to use.
GeodesicReconstructionByDilation3D - Class in inra.ijpb.morphology.geodrec: Geodesic reconstruction by dilation for 3D images of any type, using scanning algorithm and implemented only for C26 connectivity.
GeodesicReconstructionByDilation3D() - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstructionByDilation3D: Creates a new instance of geodesic reconstruction by dilation algorithm, using the default connectivity 6.
GeodesicReconstructionByDilation3D(int) - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstructionByDilation3D: Creates a new instance of geodesic reconstruction by dilation algorithm, that specifies the connectivity to use.
GeodesicReconstructionByDilation3DGray8 - Class in inra.ijpb.morphology.geodrec: Geodesic reconstruction by dilation for 3D stacks of byte processors, using hybrid algorithm and implemented only for 26 connectivity.
GeodesicReconstructionByDilation3DGray8() - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstructionByDilation3DGray8: Creates a new instance of geodesic reconstruction by dilation algorithm, using the default connectivity 6.
GeodesicReconstructionByDilation3DGray8(int) - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstructionByDilation3DGray8: Creates a new instance of geodesic reconstruction by dilation algorithm, that specifies the connectivity to use.
GeodesicReconstructionByDilation3DScanning - Class in inra.ijpb.morphology.geodrec: Geodesic reconstruction by dilation for 3D stacks using scanning algorithm, and Image3D access class.
GeodesicReconstructionByDilation3DScanning() - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstructionByDilation3DScanning: Creates a new instance of geodesic reconstruction by dilation algorithm, using the default connectivity 6.
GeodesicReconstructionByDilation3DScanning(int) - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstructionByDilation3DScanning: Creates a new instance of geodesic reconstruction by dilation algorithm, that specifies the connectivity to use.
GeodesicReconstructionByDilation3DScanningGray8 - Class in inra.ijpb.morphology.geodrec: Geodesic reconstruction by dilation for 3D stacks of byte processors, using scanning algorithm.
GeodesicReconstructionByDilation3DScanningGray8() - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstructionByDilation3DScanningGray8: Creates a new instance of geodesic reconstruction by dilation algorithm, using the default connectivity 6.
GeodesicReconstructionByDilation3DScanningGray8(int) - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstructionByDilation3DScanningGray8: Creates a new instance of geodesic reconstruction by dilation algorithm, that specifies the connectivity to use.
GeodesicReconstructionByErosion - Class in inra.ijpb.morphology.geodrec: Geodesic reconstruction by erosion for integer images.
GeodesicReconstructionByErosion() - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstructionByErosion: Creates a new instance of geodesic reconstruction by erosion algorithm, using default connectivity 4.
GeodesicReconstructionByErosion(int) - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstructionByErosion: Creates a new instance of geodesic reconstruction by erosion algorithm, that specifies the connectivity to use.
GeodesicReconstructionByErosion3DGray8 - Class in inra.ijpb.morphology.geodrec: Geodesic reconstruction by erosion for 3D stacks of byte processors, using hybrid algorithm and implemented only for the 26 connectivity.
GeodesicReconstructionByErosion3DGray8() - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstructionByErosion3DGray8: Creates a new instance of geodesic reconstruction by dilation algorithm, using the default connectivity 6.
GeodesicReconstructionByErosion3DGray8(int) - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstructionByErosion3DGray8: Creates a new instance of geodesic reconstruction by dilation algorithm, that specifies the connectivity to use.
GeodesicReconstructionByErosion3DScanning - Class in inra.ijpb.morphology.geodrec: Geodesic reconstruction by erosion for 3D stacks using scanning algorithm, and Image3D access class.
GeodesicReconstructionByErosion3DScanning() - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstructionByErosion3DScanning: Creates a new instance of geodesic reconstruction by dilation algorithm, using the default connectivity 6.
GeodesicReconstructionByErosion3DScanning(int) - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstructionByErosion3DScanning: Creates a new instance of geodesic reconstruction by dilation algorithm, that specifies the connectivity to use.
GeodesicReconstructionByErosion3DScanningGray8 - Class in inra.ijpb.morphology.geodrec: Geodesic reconstruction by erosion for 3D stacks of byte processors, using scanning algorithm.
GeodesicReconstructionByErosion3DScanningGray8() - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstructionByErosion3DScanningGray8: Creates a new instance of geodesic reconstruction by dilation algorithm, using the default connectivity 6.
GeodesicReconstructionByErosion3DScanningGray8(int) - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstructionByErosion3DScanningGray8: Creates a new instance of geodesic reconstruction by dilation algorithm, that specifies the connectivity to use.
GeodesicReconstructionHybrid - Class in inra.ijpb.morphology.geodrec: Geodesic reconstruction for planar images, using hybrid algorithm.
GeodesicReconstructionHybrid() - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstructionHybrid: Creates a new instance of geodesic reconstruction by dilation algorithm, using the default connectivity 4.
GeodesicReconstructionHybrid(int) - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstructionHybrid: Creates a new instance of geodesic reconstruction by dilation algorithm, that specifies the connectivity to use.
GeodesicReconstructionHybrid(GeodesicReconstructionType) - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstructionHybrid: Creates a new instance of geodesic reconstruction by dilation algorithm, that specifies the type of reconstruction, and using the connectivity 4.
GeodesicReconstructionHybrid(GeodesicReconstructionType, int) - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstructionHybrid: Creates a new instance of geodesic reconstruction by dilation algorithm, that specifies the type of reconstruction, and the connectivity to use.
GeodesicReconstructionScanning - Class in inra.ijpb.morphology.geodrec: Geodesic reconstruction for planar images, using scanning algorithm.
GeodesicReconstructionScanning() - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstructionScanning: Creates a new instance of geodesic reconstruction by dilation algorithm, using the default connectivity 4.
GeodesicReconstructionScanning(int) - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstructionScanning: Creates a new instance of geodesic reconstruction by dilation algorithm, that specifies the connectivity to use.
GeodesicReconstructionScanning(GeodesicReconstructionType) - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstructionScanning: Creates a new instance of geodesic reconstruction by dilation algorithm, that specifies the type of reconstruction, and using the connectivity 4.
GeodesicReconstructionScanning(GeodesicReconstructionType, int) - Constructor for class inra.ijpb.morphology.geodrec.GeodesicReconstructionScanning: Creates a new instance of geodesic reconstruction by dilation algorithm, that specifies the type of reconstruction, and the connectivity to use.
GeodesicReconstructionType - Enum in inra.ijpb.morphology.geodrec: Enumeration of the two different types of geodesic reconstruction.
GeometricMeasures2D - Class in inra.ijpb.measure: Deprecated.
use IntrinsicVolumes2D instead
GeometricMeasures3D - Class in inra.ijpb.measure: Deprecated.
use IntrinsicVolumes3D instead
GeometryUtils - Class in inra.ijpb.measure.region3d: Some utilities for geometric computations.
get(int, int) - Method in interface inra.ijpb.data.border.BorderManager: Returns the value corresponding to (x,y) position.
get(int, int) - Method in class inra.ijpb.data.border.ConstantBorder: Returns either image pixel when position is inside image bounds, or a constant value when position is outside of image bounds.
get(int, int) - Method in class inra.ijpb.data.border.MirroringBorder
get(int, int) - Method in class inra.ijpb.data.border.PeriodicBorder
get(int, int) - Method in class inra.ijpb.data.border.ReplicatedBorder: Forces both of x and y to be between 0 and the corresponding image size, and returns the corresponding image value.
get(int, int, int) - Method in interface inra.ijpb.data.border.BorderManager3D: Returns the value corresponding to (x,y) position.
get(int, int, int) - Method in class inra.ijpb.data.border.ConstantBorder3D: Returns either image pixel when position is inside image bounds, or a constant value when position is outside of image bounds.
get(int, int, int) - Method in class inra.ijpb.data.border.MirroringBorder3D
get(int, int, int) - Method in class inra.ijpb.data.border.PeriodicBorder3D
get(int, int, int) - Method in class inra.ijpb.data.border.ReplicatedBorder3D: Forces both of x and y to be between 0 and the corresponding image size, and returns the corresponding image value.
get(int, int, int) - Method in class inra.ijpb.data.image.ByteStackWrapper
get(int, int, int) - Method in class inra.ijpb.data.image.FloatStackWrapper
get(int, int, int) - Method in interface inra.ijpb.data.image.Image3D: Returns the value at the specified coordinates as an integer.
get(int, int, int) - Method in class inra.ijpb.data.image.ShortStackWrapper
getAllLabels() - Static method in enum inra.ijpb.binary.ChamferWeights: Deprecated.
getAllLabels() - Static method in enum inra.ijpb.binary.ChamferWeights3D: Deprecated.
getAllLabels() - Static method in enum inra.ijpb.binary.distmap.ChamferMasks2D
getAllLabels() - Static method in enum inra.ijpb.binary.distmap.ChamferMasks3D
getAllLabels() - Static method in enum inra.ijpb.color.ColorMaps.CommonLabelMaps
getAllLabels() - Static method in enum inra.ijpb.color.CommonColors
getAllLabels() - Static method in enum inra.ijpb.data.border.BorderManager.Type
getAllLabels() - Static method in enum inra.ijpb.data.border.BorderManager3D.Type
getAllLabels() - Static method in enum inra.ijpb.morphology.directional.DirectionalFilter.Operation: Returns the labels for all operations within this enumeration.
getAllLabels() - Static method in enum inra.ijpb.morphology.directional.DirectionalFilter.Type: Returns all the labels for this enumeration.
getAllLabels() - Static method in enum inra.ijpb.morphology.Morphology.Operation: Returns the list of labels for this enumeration.
getAllLabels() - Static method in enum inra.ijpb.morphology.Strel.Shape: Returns a set of labels for most of classical structuring elements.
getAllLabels() - Static method in enum inra.ijpb.morphology.Strel3D.Shape: Returns a set of labels for most of classical structuring elements.
getAllLabels() - Static method in enum inra.ijpb.plugins.Connectivity2D: Returns all the labels for this enumeration.
getAllLabels() - Static method in enum inra.ijpb.plugins.Connectivity3D: Returns all the labels for this enumeration.
getAllLabels() - Static method in enum inra.ijpb.plugins.ExtendedMinAndMax3DPlugin.Operation: Returns all the labels of this enum.
getAllLabels() - Static method in enum inra.ijpb.plugins.ExtendedMinAndMaxPlugin.Operation: Returns all the labels of this enum.
getAllLabels() - Static method in enum inra.ijpb.plugins.ImposeMinAndMax3DPlugin.Operation: Returns all the labels for this enumeration.
getAllLabels() - Static method in enum inra.ijpb.plugins.ImposeMinAndMaxPlugin.Operation: Returns all the labels for this enumeration.
getAllLabels() - Static method in enum inra.ijpb.plugins.LabelMapMorphologicalFilteringPlugin.Operation: Returns the list of labels for this enumeration.
getAllLabels() - Static method in enum inra.ijpb.plugins.LabelSizeFilteringPlugin.Operation: Returns all the labels for this enumeration.
getAllLabels() - Static method in enum inra.ijpb.plugins.MorphologicalReconstruction3DPlugin.Operation: Returns all the labels for this enumeration.
getAllLabels() - Static method in enum inra.ijpb.plugins.MorphologicalReconstructionPlugin.Operation: Returns all the labels for this enumeration.
getAllLabels() - Static method in enum inra.ijpb.plugins.RegionalMinAndMax3DPlugin.Operation: Returns all the labels for this enumeration.
getAllLabels() - Static method in enum inra.ijpb.plugins.RegionalMinAndMaxPlugin.Operation: Returns all the labels for this enumeration.
getAllLabels() - Static method in enum inra.ijpb.util.CommonColors: Deprecated.

Returns all the labels for this enumeration.
getAnimation(double, double) - Method in class inra.ijpb.watershed.WatershedTransform2D: Apply fast watersheds using flooding simulations, as described by Soille, Pierre, and Luc M.
getAnimationPriorityQueue() - Method in class inra.ijpb.watershed.MarkerControlledWatershedTransform2D: Get animation of each h-step of the watershed transform on the inputImage, using the labeled markers from markerImage and restricted to the white areas of maskImage.
getAnimationPriorityQueueAndDams() - Method in class inra.ijpb.watershed.MarkerControlledWatershedTransform2D: Get an animation of the different steps of the watershed transform applied on inputImage, using the labeled markers from markerImage and restricted to the white areas of maskImage (optionally).
getAnimationSortedList() - Method in class inra.ijpb.watershed.MarkerControlledWatershedTransform2D: Deprecated.
The algorithm with a sorted list does not visit the pixels based on their h value and proximity to markers so it is not a true watershed method.
getAnimationSortedListAndDams() - Method in class inra.ijpb.watershed.MarkerControlledWatershedTransform2D: Deprecated.
The algorithm with a sorted list does not visit the pixels based on their h value and proximity to markers so it is not a true watershed method.
getBackwardFloatOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask2D
getBackwardFloatOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask2DW2Float
getBackwardFloatOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask3D
getBackwardFloatOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask3DW3Float
getBackwardOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask2D
getBackwardOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask2DW2
getBackwardOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask2DW2Float
getBackwardOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask2DW3
getBackwardOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask2DW4
getBackwardOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask3D
getBackwardOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask3DW3
getBackwardOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask3DW3Float
getBackwardOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask3DW4
getBackwardOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask3DW5
getBackwardOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask3DW6
getBackwardOffsets(float[]) - Static method in enum inra.ijpb.binary.ChamferWeights3D: Deprecated.

Computes the collection of weighted offsets corresponding to a scan of the voxels in a 3D image in the backward direction.
getBackwardOffsets(short[]) - Static method in enum inra.ijpb.binary.ChamferWeights3D: Deprecated.

Computes the collection of weighted offsets corresponding to a scan of the voxels in a 3D image in the backward direction.
getBoundary(int) - Method in class inra.ijpb.label.conncomp.BoundarySet: Retrieve a Boundary from its label.
getByteArrays(ImageStack) - Static method in class inra.ijpb.data.image.Images3D: Extracts the byte arrays corresponding to the slices of a stack containing instances of ByteProcessor.
getCenter() - Method in class inra.ijpb.geometry.Circle2D
getChannelName() - Method in class inra.ijpb.morphology.strel.AbstractStrel: Returns the name of the channel currently processed, or null by default.
getChannelName() - Method in interface inra.ijpb.morphology.Strel: Returns the name of the channel currently processed, or null by default.
getColor() - Method in enum inra.ijpb.color.CommonColors
getColor() - Method in enum inra.ijpb.util.CommonColors: Deprecated.
getComputePaths() - Method in class inra.ijpb.measure.region2d.GeodesicDiameter: Returns the value of the computePaths option.
getConnectivity() - Method in class inra.ijpb.measure.region2d.IntrinsicVolumesAnalyzer2D
getConnectivity() - Method in class inra.ijpb.measure.region3d.IntrinsicVolumesAnalyzer3D
getConnectivity() - Method in class inra.ijpb.morphology.attrfilt.AreaOpeningQueue: Returns the current connectivity value for this algorithm.
getConnectivity() - Method in class inra.ijpb.morphology.attrfilt.BoxDiagonalOpeningQueue: Returns the current connectivity value for this algorithm.
getConnectivity() - Method in class inra.ijpb.morphology.attrfilt.SizeOpening3DQueue: Returns the current connectivity value for this algorithm.
getConnectivity() - Method in class inra.ijpb.morphology.extrema.RegionalExtrema3DAlgo: Returns the connectivity value.
getConnectivity() - Method in class inra.ijpb.morphology.extrema.RegionalExtremaAlgo: Returns the connectivity value.
getConnectivity() - Method in interface inra.ijpb.morphology.geodrec.GeodesicReconstruction3DAlgo: Returns the chosen connectivity of the algorithm, either 6 or 26.
getConnectivity() - Method in class inra.ijpb.morphology.geodrec.GeodesicReconstruction3DAlgoStub
getConnectivity() - Method in interface inra.ijpb.morphology.geodrec.GeodesicReconstructionAlgo: Returns the chosen connectivity of the algorithm, either 4 or 8.
getConnectivity() - Method in class inra.ijpb.morphology.geodrec.GeodesicReconstructionAlgoStub
getConnectivity() - Method in class inra.ijpb.watershed.WatershedTransform2D: Get the pixel connectivity (4 or 8)
getConnectivity() - Method in class inra.ijpb.watershed.WatershedTransform3D: Get the voxel connectivity (6 or 26)
getCurrentProgress() - Method in class inra.ijpb.algo.AlgoEvent
getCursor() - Method in class inra.ijpb.data.Neighborhood2D
getCursor() - Method in class inra.ijpb.data.Neighborhood3D
getCursor() - Method in class inra.ijpb.data.PixelRecord
getCursor() - Method in class inra.ijpb.data.VoxelRecord
getDams - Static variable in class inra.ijpb.plugins.MarkerControlledWatershed3DPlugin: flag to calculate watershed dams
getDiceCoefficient(ImagePlus, ImagePlus) - Static method in class inra.ijpb.label.LabelImages: Get the Dice coefficient between two label images.
getDiceCoefficient(ImageStack, ImageStack) - Static method in class inra.ijpb.label.LabelImages: Get the Dice coefficient between two label images.
getDiceCoefficient(ImageProcessor, ImageProcessor) - Static method in class inra.ijpb.label.LabelImages: Get the Dice coefficient between two label images.
getDiceCoefficientPerLabel(ImagePlus, ImagePlus) - Static method in class inra.ijpb.label.LabelImages: Get the Dice coefficient per label (intersection over union overlap) between two label images.
getDiceCoefficientPerLabel(ImageStack, ImageStack) - Static method in class inra.ijpb.label.LabelImages: Get the Dice coefficient per label (intersection over union overlap) between two label images.
getDiceCoefficientPerLabel(ImageProcessor, ImageProcessor) - Static method in class inra.ijpb.label.LabelImages: Get the Dice coefficient per label (intersection over union overlap) between two label images.
getDirection() - Method in class inra.ijpb.geometry.StraightLine2D
getDirectionNumber() - Method in class inra.ijpb.measure.region2d.IntrinsicVolumesAnalyzer2D
getDirectionNumber() - Method in class inra.ijpb.measure.region3d.IntrinsicVolumesAnalyzer3D
getExtremaType() - Method in class inra.ijpb.morphology.extrema.RegionalExtrema3DAlgo: Returns the type of extrema.
getExtremaType() - Method in class inra.ijpb.morphology.extrema.RegionalExtremaAlgo: Returns the type of extrema.
getf(int, int) - Method in interface inra.ijpb.data.border.BorderManager: Returns the floating-point value corresponding to (x,y) position.
getf(int, int) - Method in class inra.ijpb.data.border.ConstantBorder: Returns either image pixel when position is inside image bounds, or a constant value when position is outside of image bounds.
getf(int, int) - Method in class inra.ijpb.data.border.MirroringBorder
getf(int, int) - Method in class inra.ijpb.data.border.PeriodicBorder
getf(int, int) - Method in class inra.ijpb.data.border.ReplicatedBorder: Forces both of x and y to be between 0 and the corresponding image size, and returns the corresponding image value.
getFalseNegativeError(ImagePlus, ImagePlus) - Static method in class inra.ijpb.label.LabelImages: Get the total false negative error between two label images (source and target).
getFalseNegativeError(ImageStack, ImageStack) - Static method in class inra.ijpb.label.LabelImages: Get the total false negative error between two label images (source and target).
getFalseNegativeError(ImageProcessor, ImageProcessor) - Static method in class inra.ijpb.label.LabelImages: Get the total false negative error between two label images (source and target).
getFalseNegativeErrorPerLabel(ImagePlus, ImagePlus) - Static method in class inra.ijpb.label.LabelImages: Get the false negative error between two label images (source and target) per each individual labeled region.
getFalseNegativeErrorPerLabel(ImageStack, ImageStack) - Static method in class inra.ijpb.label.LabelImages: Get the false negative error between two label images (source and target) per each individual labeled region.
getFalseNegativeErrorPerLabel(ImageProcessor, ImageProcessor) - Static method in class inra.ijpb.label.LabelImages: Get the false negative error between two label images (source and target) per each individual labeled region.
getFalsePositiveError(ImagePlus, ImagePlus) - Static method in class inra.ijpb.label.LabelImages: Get the total false positive error between two label images (source and target).
getFalsePositiveError(ImageStack, ImageStack) - Static method in class inra.ijpb.label.LabelImages: Get the total false positive error between two label images (source and target).
getFalsePositiveError(ImageProcessor, ImageProcessor) - Static method in class inra.ijpb.label.LabelImages: Get the total false positive error between two label images (source and target).
getFalsePositiveErrorPerLabel(ImagePlus, ImagePlus) - Static method in class inra.ijpb.label.LabelImages: Get the false positive error between two label images (source and target) per each individual labeled region.
getFalsePositiveErrorPerLabel(ImageStack, ImageStack) - Static method in class inra.ijpb.label.LabelImages: Get the false positive error between two label images (source and target) per each individual labeled region.
getFalsePositiveErrorPerLabel(ImageProcessor, ImageProcessor) - Static method in class inra.ijpb.label.LabelImages: Get the false positive error between two label images (source and target) per each individual labeled region.
getFloatArrays(ImageStack) - Static method in class inra.ijpb.data.image.Images3D: Extracts the float arrays corresponding to the slices of a stack containing instances of FloatProcessor.
getFloatOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask2D
getFloatOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask3D
getFloatWeights() - Method in enum inra.ijpb.binary.ChamferWeights: Deprecated.
getFloatWeights() - Method in enum inra.ijpb.binary.ChamferWeights3D: Deprecated.
getForwardFloatOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask2D
getForwardFloatOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask2DW2Float
getForwardFloatOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask3D
getForwardFloatOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask3DW3Float
getForwardOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask2D
getForwardOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask2DW2
getForwardOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask2DW2Float
getForwardOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask2DW3
getForwardOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask2DW4
getForwardOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask3D
getForwardOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask3DW3
getForwardOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask3DW3Float
getForwardOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask3DW4
getForwardOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask3DW5
getForwardOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask3DW6
getForwardOffsets(float[]) - Static method in enum inra.ijpb.binary.ChamferWeights3D: Deprecated.

Computes the collection of weighted offsets corresponding to a scan of the voxels in a 3D image in the forward direction.
getForwardOffsets(short[]) - Static method in enum inra.ijpb.binary.ChamferWeights3D: Deprecated.

Computes the collection of weighted offsets corresponding to a scan of the voxels in a 3D image in the forward direction.
getJaccardIndex(ImagePlus, ImagePlus) - Static method in class inra.ijpb.label.LabelImages: Get the Jaccard index (intersection over union overlap) between two label images.
getJaccardIndex(ImageStack, ImageStack) - Static method in class inra.ijpb.label.LabelImages: Get the Jaccard index (intersection over union overlap) between two label images.
getJaccardIndex(ImageProcessor, ImageProcessor) - Static method in class inra.ijpb.label.LabelImages: Get the Jaccard index (intersection over union overlap) between two label images.
getJaccardIndexPerLabel(ImagePlus, ImagePlus) - Static method in class inra.ijpb.label.LabelImages: Get the Jaccard index per label (intersection over union overlap) between two label images.
getJaccardIndexPerLabel(ImageStack, ImageStack) - Static method in class inra.ijpb.label.LabelImages: Get the Jaccard index per label (intersection over union overlap) between two label images.
getJaccardIndexPerLabel(ImageProcessor, ImageProcessor) - Static method in class inra.ijpb.label.LabelImages: Get the Jaccard index per label (intersection over union overlap) between two label images.
getKurtosis() - Method in class inra.ijpb.measure.IntensityMeasures: Get kurtosis voxel values per label
getLabel() - Method in enum inra.ijpb.color.ColorMaps.CommonLabelMaps: Get label name associated to color map
getLabel() - Method in enum inra.ijpb.color.CommonColors
getLabel() - Method in enum inra.ijpb.data.border.BorderManager.Type
getLabel() - Method in enum inra.ijpb.data.border.BorderManager3D.Type
getLabel() - Method in enum inra.ijpb.util.CommonColors: Deprecated.
getLargestPossibleLabel(ImageStack) - Static method in class inra.ijpb.label.LabelUtils: Determine the largest possible label that can be used with the specified image.
getLargestPossibleLabel(ImageProcessor) - Static method in class inra.ijpb.label.LabelUtils: Determine the largest possible label that can be used with the specified image.
getMask() - Method in enum inra.ijpb.binary.distmap.ChamferMasks2D
getMask() - Method in enum inra.ijpb.binary.distmap.ChamferMasks3D
getMask() - Method in class inra.ijpb.morphology.directional.OrientedLineStrel: Returns the structuring element as a mask.
getMask() - Method in class inra.ijpb.morphology.strel.ChamferStrel
getMask() - Method in class inra.ijpb.morphology.strel.Cross3x3Strel
getMask() - Method in class inra.ijpb.morphology.strel.DiamondStrel
getMask() - Method in class inra.ijpb.morphology.strel.DiskStrel
getMask() - Method in interface inra.ijpb.morphology.Strel: Returns the structuring element as a mask.
getMask() - Method in class inra.ijpb.morphology.strel.LinearDiagDownStrel
getMask() - Method in class inra.ijpb.morphology.strel.LinearDiagUpStrel
getMask() - Method in class inra.ijpb.morphology.strel.LinearHorizontalStrel
getMask() - Method in class inra.ijpb.morphology.strel.LinearVerticalStrel
getMask() - Method in class inra.ijpb.morphology.strel.OctagonStrel
getMask() - Method in class inra.ijpb.morphology.strel.SquareStrel
getMask3D() - Method in class inra.ijpb.morphology.strel.AbstractStrel
getMask3D() - Method in class inra.ijpb.morphology.strel.BallStrel
getMask3D() - Method in class inra.ijpb.morphology.strel.ChamferStrel3D
getMask3D() - Method in class inra.ijpb.morphology.strel.Cross3DStrel
getMask3D() - Method in class inra.ijpb.morphology.strel.CubeStrel
getMask3D() - Method in class inra.ijpb.morphology.strel.CuboidStrel
getMask3D() - Method in class inra.ijpb.morphology.strel.EllipsoidStrel
getMask3D() - Method in class inra.ijpb.morphology.strel.ExtrudedStrel
getMask3D() - Method in class inra.ijpb.morphology.strel.LinearDepthStrel3D
getMask3D() - Method in interface inra.ijpb.morphology.Strel3D: Returns the structuring element as a mask.
getMax() - Method in class inra.ijpb.measure.IntensityMeasures: Get maximum voxel values per label
getMax() - Method in class inra.ijpb.morphology.strel.LocalBufferedHistogram: Returns the maximum value stored in this local histogram
getMax() - Method in class inra.ijpb.morphology.strel.LocalExtremumBufferDouble: Returns the maximum value stored in this local histogram
getMax() - Method in class inra.ijpb.morphology.strel.LocalExtremumBufferGray8: Returns the maximum value stored in this local histogram
getMean() - Method in class inra.ijpb.measure.IntensityMeasures: Get mean voxel values per label
getMedian() - Method in class inra.ijpb.measure.IntensityMeasures: Get median voxel values per label
getMin() - Method in class inra.ijpb.measure.IntensityMeasures: Get minimum voxel values per label
getMin() - Method in class inra.ijpb.morphology.strel.LocalBufferedHistogram: Returns the minimum value stored in this local histogram
getMode() - Method in class inra.ijpb.measure.IntensityMeasures: Get mode voxel values per label
getNeighbors() - Method in class inra.ijpb.data.Neighborhood2D
getNeighbors() - Method in class inra.ijpb.data.Neighborhood2DC4
getNeighbors() - Method in class inra.ijpb.data.Neighborhood2DC8
getNeighbors() - Method in class inra.ijpb.data.Neighborhood3D
getNeighbors() - Method in class inra.ijpb.data.Neighborhood3DC26
getNeighbors() - Method in class inra.ijpb.data.Neighborhood3DC6
getNeighborsKurtosis() - Method in class inra.ijpb.measure.IntensityMeasures: Get the intensity kurtosis values of the neighbor labels
getNeighborsMax() - Method in class inra.ijpb.measure.IntensityMeasures: Get the maximum intensity values of the neighbor labels
getNeighborsMean() - Method in class inra.ijpb.measure.IntensityMeasures: Get the mean intensity values of the neighbor labels
getNeighborsMedian() - Method in class inra.ijpb.measure.IntensityMeasures: Get the median intensity values of the neighbor labels
getNeighborsMin() - Method in class inra.ijpb.measure.IntensityMeasures: Get the minimum intensity values of the neighbor labels
getNeighborsMode() - Method in class inra.ijpb.measure.IntensityMeasures: Get the intensity mode value of the neighbor labels
getNeighborsSkewness() - Method in class inra.ijpb.measure.IntensityMeasures: Get the intensity skewness values of the neighbor labels
getNeighborsStdDev() - Method in class inra.ijpb.measure.IntensityMeasures: Get the standard deviation of the intensity values of the neighbor labels
getNorm() - Method in class inra.ijpb.geometry.Vector2D: Computes the norm of the vector, given as the square root of the sum of squared coordinates.
getNorm() - Method in class inra.ijpb.geometry.Vector3D: Computes the norm of the vector, given as the square root of the sum of squared coordinates.
getNorm() - Method in class inra.ijpb.measure.Vector3d: Deprecated.

Computes the norm of the vector, given as the square root of the sum of squared coordinates.
getNormalizationWeight() - Method in class inra.ijpb.binary.distmap.ChamferMask2D
getNormalizationWeight() - Method in class inra.ijpb.binary.distmap.ChamferMask2DW2Float
getNormalizationWeight() - Method in class inra.ijpb.binary.distmap.ChamferMask3D
getNormalizationWeight() - Method in class inra.ijpb.binary.distmap.ChamferMask3DW3Float
getNumberOfVoxels() - Method in class inra.ijpb.measure.LabeledVoxelsMeasure: Get number of voxels per label
getOffset() - Method in class inra.ijpb.morphology.directional.OrientedLineStrel: Returns the offset in the mask.
getOffset() - Method in class inra.ijpb.morphology.strel.BallStrel
getOffset() - Method in class inra.ijpb.morphology.strel.ChamferStrel
getOffset() - Method in class inra.ijpb.morphology.strel.ChamferStrel3D
getOffset() - Method in class inra.ijpb.morphology.strel.Cross3DStrel
getOffset() - Method in class inra.ijpb.morphology.strel.Cross3x3Strel
getOffset() - Method in class inra.ijpb.morphology.strel.CubeStrel
getOffset() - Method in class inra.ijpb.morphology.strel.CuboidStrel
getOffset() - Method in class inra.ijpb.morphology.strel.DiamondStrel
getOffset() - Method in class inra.ijpb.morphology.strel.DiskStrel
getOffset() - Method in class inra.ijpb.morphology.strel.EllipsoidStrel
getOffset() - Method in class inra.ijpb.morphology.strel.ExtrudedStrel
getOffset() - Method in interface inra.ijpb.morphology.Strel: Returns the offset in the mask.
getOffset() - Method in class inra.ijpb.morphology.strel.LinearDepthStrel3D
getOffset() - Method in class inra.ijpb.morphology.strel.LinearDiagDownStrel
getOffset() - Method in class inra.ijpb.morphology.strel.LinearDiagUpStrel
getOffset() - Method in class inra.ijpb.morphology.strel.LinearHorizontalStrel
getOffset() - Method in class inra.ijpb.morphology.strel.LinearVerticalStrel
getOffset() - Method in class inra.ijpb.morphology.strel.OctagonStrel
getOffset() - Method in class inra.ijpb.morphology.strel.SquareStrel
getOffset() - Method in interface inra.ijpb.morphology.Strel3D: Returns the offset in the mask for each direction.
getOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask2D
getOffsets() - Method in class inra.ijpb.binary.distmap.ChamferMask3D
getOpenImageNames() - Static method in class inra.ijpb.util.IJUtils: Return an array of String containing the name of all the currently open images.
getOrigin() - Method in class inra.ijpb.geometry.StraightLine2D
getPosition() - Method in class inra.ijpb.label.LabelValues.Position3DValuePair: Returns the position of the voxel.
getPosition() - Method in class inra.ijpb.label.LabelValues.PositionValuePair: Returns the position of the pixel.
getProgressRatio() - Method in class inra.ijpb.algo.AlgoEvent
getRadius() - Method in class inra.ijpb.geometry.Circle2D
getReconstructionType() - Method in class inra.ijpb.morphology.geodrec.GeodesicReconstruction3DHybrid0Float
getReconstructionType() - Method in class inra.ijpb.morphology.geodrec.GeodesicReconstruction3DHybrid0Gray16
getReconstructionType() - Method in class inra.ijpb.morphology.geodrec.GeodesicReconstruction3DHybrid0Gray8
getReconstructionType() - Method in class inra.ijpb.morphology.geodrec.GeodesicReconstruction3DHybrid1Image3D
getReconstructionType() - Method in class inra.ijpb.morphology.geodrec.GeodesicReconstructionHybrid
getReconstructionType() - Method in class inra.ijpb.morphology.geodrec.GeodesicReconstructionScanning
getResultsTable() - Method in class inra.ijpb.measure.ResultsBuilder: Get the current results table.
getSelectedLabels(ImagePlus, Roi) - Static method in class inra.ijpb.label.LabelImages: Get list of selected labels in label image.
getShifts() - Method in class inra.ijpb.morphology.directional.OrientedLineStrel: Returns the structuring element as a set of shifts.
getShifts() - Method in class inra.ijpb.morphology.strel.ChamferStrel
getShifts() - Method in class inra.ijpb.morphology.strel.Cross3x3Strel
getShifts() - Method in class inra.ijpb.morphology.strel.DiamondStrel
getShifts() - Method in class inra.ijpb.morphology.strel.DiskStrel
getShifts() - Method in interface inra.ijpb.morphology.Strel: Returns the structuring element as a set of shifts.
getShifts() - Method in class inra.ijpb.morphology.strel.LinearDiagDownStrel
getShifts() - Method in class inra.ijpb.morphology.strel.LinearDiagUpStrel
getShifts() - Method in class inra.ijpb.morphology.strel.LinearHorizontalStrel
getShifts() - Method in class inra.ijpb.morphology.strel.LinearVerticalStrel
getShifts() - Method in class inra.ijpb.morphology.strel.OctagonStrel
getShifts() - Method in class inra.ijpb.morphology.strel.SquareStrel
getShifts3D() - Method in class inra.ijpb.morphology.strel.AbstractStrel
getShifts3D() - Method in class inra.ijpb.morphology.strel.BallStrel
getShifts3D() - Method in class inra.ijpb.morphology.strel.ChamferStrel3D
getShifts3D() - Method in class inra.ijpb.morphology.strel.Cross3DStrel
getShifts3D() - Method in class inra.ijpb.morphology.strel.CubeStrel
getShifts3D() - Method in class inra.ijpb.morphology.strel.CuboidStrel
getShifts3D() - Method in class inra.ijpb.morphology.strel.EllipsoidStrel
getShifts3D() - Method in class inra.ijpb.morphology.strel.ExtrudedStrel
getShifts3D() - Method in class inra.ijpb.morphology.strel.LinearDepthStrel3D
getShifts3D() - Method in interface inra.ijpb.morphology.Strel3D: Returns the structuring element as a set of shifts.
getShortArrays(ImageStack) - Static method in class inra.ijpb.data.image.Images3D: Extracts the short arrays corresponding to the slices of a stack containing instances of ShortProcessor.
getShortNormalizationWeight() - Method in class inra.ijpb.binary.distmap.ChamferMask2D
getShortNormalizationWeight() - Method in class inra.ijpb.binary.distmap.ChamferMask2DW2
getShortNormalizationWeight() - Method in class inra.ijpb.binary.distmap.ChamferMask2DW2Float
getShortNormalizationWeight() - Method in class inra.ijpb.binary.distmap.ChamferMask2DW3
getShortNormalizationWeight() - Method in class inra.ijpb.binary.distmap.ChamferMask2DW4
getShortNormalizationWeight() - Method in class inra.ijpb.binary.distmap.ChamferMask3D
getShortNormalizationWeight() - Method in class inra.ijpb.binary.distmap.ChamferMask3DW3
getShortNormalizationWeight() - Method in class inra.ijpb.binary.distmap.ChamferMask3DW3Float
getShortNormalizationWeight() - Method in class inra.ijpb.binary.distmap.ChamferMask3DW4
getShortNormalizationWeight() - Method in class inra.ijpb.binary.distmap.ChamferMask3DW5
getShortNormalizationWeight() - Method in class inra.ijpb.binary.distmap.ChamferMask3DW6
getShortWeights() - Method in enum inra.ijpb.binary.ChamferWeights: Deprecated.
getShortWeights() - Method in enum inra.ijpb.binary.ChamferWeights3D: Deprecated.
getSign() - Method in enum inra.ijpb.morphology.geodrec.GeodesicReconstructionType: Returns the sign that can be used in algorithms generic for dilation and erosion.
getSize() - Method in class inra.ijpb.morphology.directional.OrientedLineStrel: Returns the size of the structuring element, as an array of size in each direction.
getSize() - Method in class inra.ijpb.morphology.strel.BallStrel
getSize() - Method in class inra.ijpb.morphology.strel.ChamferStrel
getSize() - Method in class inra.ijpb.morphology.strel.ChamferStrel3D
getSize() - Method in class inra.ijpb.morphology.strel.Cross3DStrel
getSize() - Method in class inra.ijpb.morphology.strel.Cross3x3Strel
getSize() - Method in class inra.ijpb.morphology.strel.CubeStrel
getSize() - Method in class inra.ijpb.morphology.strel.CuboidStrel
getSize() - Method in class inra.ijpb.morphology.strel.DiamondStrel
getSize() - Method in class inra.ijpb.morphology.strel.DiskStrel
getSize() - Method in class inra.ijpb.morphology.strel.EllipsoidStrel
getSize() - Method in class inra.ijpb.morphology.strel.ExtrudedStrel
getSize() - Method in interface inra.ijpb.morphology.Strel: Returns the size of the structuring element, as an array of size in each direction.
getSize() - Method in class inra.ijpb.morphology.strel.LinearDepthStrel3D
getSize() - Method in class inra.ijpb.morphology.strel.LinearDiagDownStrel
getSize() - Method in class inra.ijpb.morphology.strel.LinearDiagUpStrel
getSize() - Method in class inra.ijpb.morphology.strel.LinearHorizontalStrel
getSize() - Method in class inra.ijpb.morphology.strel.LinearVerticalStrel
getSize() - Method in class inra.ijpb.morphology.strel.OctagonStrel
getSize() - Method in class inra.ijpb.morphology.strel.SquareStrel
getSize() - Method in interface inra.ijpb.morphology.Strel3D: Returns the size of the structuring element, as an array of size in each direction.
getSize(int) - Method in class inra.ijpb.data.image.ByteStackWrapper
getSize(int) - Method in class inra.ijpb.data.image.FloatStackWrapper
getSize(int) - Method in interface inra.ijpb.data.image.Image3D: Returns the number of voxels along the specified dimension.
getSize(int) - Method in class inra.ijpb.data.image.ShortStackWrapper
getSkewness() - Method in class inra.ijpb.measure.IntensityMeasures: Get skewness voxel values per label
getSource() - Method in class inra.ijpb.algo.AlgoEvent
getStatus() - Method in class inra.ijpb.algo.AlgoEvent
getStdDev() - Method in class inra.ijpb.measure.IntensityMeasures: Get standard deviation of voxel values per label
getStrel() - Method in class inra.ijpb.morphology.filter.MorphologicalFilter
getSuffix() - Method in enum inra.ijpb.plugins.ExtendedMinAndMax3DPlugin.Operation: Returns the suffix to add to new ImagePlus created with thin operation.
getSuffix() - Method in enum inra.ijpb.plugins.ExtendedMinAndMaxPlugin.Operation: Returns the suffix to add to new ImagePlus created with thin operation.
getSuffix() - Method in enum inra.ijpb.plugins.RegionalMinAndMax3DPlugin.Operation: Returns the suffix added to processed images.
getSuffix() - Method in enum inra.ijpb.plugins.RegionalMinAndMaxPlugin.Operation: Returns the suffix added to processed images.
getSumOfVoxels() - Method in class inra.ijpb.measure.LabeledVoxelsMeasure: Get sum of all voxel intensities per labeled object
getTableWindows() - Static method in class inra.ijpb.util.IJUtils: Iterates on the list of TextWindows, and keeps only the ones containing a non-null ResultsTable
getTargetOverlapPerLabel(ImagePlus, ImagePlus) - Static method in class inra.ijpb.label.LabelImages: Get the target overlap between two label images (source and target) per each individual labeled region.
getTargetOverlapPerLabel(ImageStack, ImageStack) - Static method in class inra.ijpb.label.LabelImages: Get the target overlap between two label images (source and target) per each individual labeled region.
getTargetOverlapPerLabel(ImageProcessor, ImageProcessor) - Static method in class inra.ijpb.label.LabelImages: Get the target overlap between two label images (source and target) per each individual labeled region.
getTotalOverlap(ImagePlus, ImagePlus) - Static method in class inra.ijpb.label.LabelImages: Get the total overlap between two label images (source and target).
getTotalOverlap(ImageStack, ImageStack) - Static method in class inra.ijpb.label.LabelImages: Get the total overlap between two label images (source and target).
getTotalOverlap(ImageProcessor, ImageProcessor) - Static method in class inra.ijpb.label.LabelImages: Get the total overlap between two label images (source and target).
getTotalProgress() - Method in class inra.ijpb.algo.AlgoEvent
getValue() - Method in class inra.ijpb.data.PixelRecord
getValue() - Method in class inra.ijpb.data.VoxelRecord
getValue() - Method in class inra.ijpb.label.LabelValues.Position3DValuePair: Returns the value of the voxel.
getValue() - Method in class inra.ijpb.label.LabelValues.PositionValuePair: Returns the value of the pixel.
getValue() - Method in enum inra.ijpb.plugins.Connectivity2D: Returns the integer value associated to this connectivity.
getValue() - Method in enum inra.ijpb.plugins.Connectivity3D: Returns the integer value associated to this connectivity.
getValue(int, int, int) - Method in class inra.ijpb.data.image.ByteStackWrapper
getValue(int, int, int) - Method in class inra.ijpb.data.image.FloatStackWrapper
getValue(int, int, int) - Method in interface inra.ijpb.data.image.Image3D: Returns the value at the specified coordinates as a double.
getValue(int, int, int) - Method in class inra.ijpb.data.image.ShortStackWrapper
getValue(Cursor3D) - Method in class inra.ijpb.data.image.ByteStackWrapper
getValue(Cursor3D) - Method in class inra.ijpb.data.image.FloatStackWrapper
getValue(Cursor3D) - Method in interface inra.ijpb.data.image.Image3D: Returns the value at the specified coordinates as a double.
getValue(Cursor3D) - Method in class inra.ijpb.data.image.ShortStackWrapper
getVertex(int) - Method in class inra.ijpb.geometry.Polygon2D: Returns index at the specific index
getVolume() - Method in class inra.ijpb.measure.LabeledVoxelsMeasure: Get volume per labeled object based on the input image calibration
getVolumeSimilarity(ImagePlus, ImagePlus) - Static method in class inra.ijpb.label.LabelImages: Get the total volume similarity between two label images (source and target).
getVolumeSimilarity(ImageStack, ImageStack) - Static method in class inra.ijpb.label.LabelImages: Get the total volume similarity between two label images (source and target).
getVolumeSimilarity(ImageProcessor, ImageProcessor) - Static method in class inra.ijpb.label.LabelImages: Get the total volume similarity between two label images (source and target).
getVolumeSimilarityPerLabel(ImagePlus, ImagePlus) - Static method in class inra.ijpb.label.LabelImages: Get the volume similarity between two label images (source and target) per each individual labeled region.
getVolumeSimilarityPerLabel(ImageStack, ImageStack) - Static method in class inra.ijpb.label.LabelImages: Get the volume similarity between two label images (source and target) per each individual labeled region.
getVolumeSimilarityPerLabel(ImageProcessor, ImageProcessor) - Static method in class inra.ijpb.label.LabelImages: Get the volume similarity between two label images (source and target) per each individual labeled region.
getX() - Method in class inra.ijpb.data.Cursor2D
getX() - Method in class inra.ijpb.data.Cursor3D
getX() - Method in class inra.ijpb.geometry.Point3D
getX() - Method in class inra.ijpb.geometry.Vector2D: Returns the x coordinate of the vector.
getX() - Method in class inra.ijpb.geometry.Vector3D: Returns the x coordinate of the vector.
getX() - Method in class inra.ijpb.measure.Vector3d: Deprecated.

Returns the x coordinate of the vector.
getXMax() - Method in class inra.ijpb.geometry.Box2D
getXMax() - Method in class inra.ijpb.geometry.Box3D
getXMin() - Method in class inra.ijpb.geometry.Box2D
getXMin() - Method in class inra.ijpb.geometry.Box3D
getY() - Method in class inra.ijpb.data.Cursor2D
getY() - Method in class inra.ijpb.data.Cursor3D
getY() - Method in class inra.ijpb.geometry.Point3D
getY() - Method in class inra.ijpb.geometry.Vector2D: Returns the y coordinate of the vector.
getY() - Method in class inra.ijpb.geometry.Vector3D: Returns the y coordinate of the vector.
getY() - Method in class inra.ijpb.measure.Vector3d: Deprecated.

Returns the y coordinate of the vector.
getYMax() - Method in class inra.ijpb.geometry.Box2D
getYMax() - Method in class inra.ijpb.geometry.Box3D
getYMin() - Method in class inra.ijpb.geometry.Box2D
getYMin() - Method in class inra.ijpb.geometry.Box3D
getZ() - Method in class inra.ijpb.data.Cursor3D
getZ() - Method in class inra.ijpb.geometry.Point3D
getZ() - Method in class inra.ijpb.geometry.Vector3D: Returns the z coordinate of the vector.
getZ() - Method in class inra.ijpb.measure.Vector3d: Deprecated.

Returns the z coordinate of the vector.
getZMax() - Method in class inra.ijpb.geometry.Box3D
getZMin() - Method in class inra.ijpb.geometry.Box3D
GLASBEY - inra.ijpb.color.ColorMaps.CommonLabelMaps: Colormap containing Glasbey colors
GLASBEY_BRIGHT - inra.ijpb.color.ColorMaps.CommonLabelMaps: Colormap containing Glasbey colors
GLASBEY_DARK - inra.ijpb.color.ColorMaps.CommonLabelMaps: Colormap containing Glasbey colors
GOLDEN_ANGLE - inra.ijpb.color.ColorMaps.CommonLabelMaps: A colormap with contrasted adjacent colors, useful for label images
gradient(ImagePlus, Strel3D) - Static method in class inra.ijpb.morphology.Morphology: Computes the morphological gradient of the input image.
gradient(ImageStack, Strel3D) - Static method in class inra.ijpb.morphology.Morphology: Computes the morphological gradient of the input 3D image.
gradient(ImageProcessor, Strel) - Static method in class inra.ijpb.morphology.Morphology: Computes the morphological gradient of the input image.
Gradient - Class in inra.ijpb.morphology.filter: Performs morphological gradient, also known as "Beucher Gradient", on 2D/3D images.
Gradient(Strel3D) - Constructor for class inra.ijpb.morphology.filter.Gradient: Creates a new Morphological Gradient operator with the specified structuring element.
GRADIENT - inra.ijpb.morphology.Morphology.Operation: Morphological gradient (difference of dilation with erosion)
GRAY - inra.ijpb.color.CommonColors: The White color
GRAY - inra.ijpb.data.border.BorderManager.Type: uses gray value (0) to fill border
GRAY - inra.ijpb.data.border.BorderManager3D.Type: uses gray value (127) to fill border
GRAY - inra.ijpb.util.CommonColors: Deprecated.

The White color
GRAYS - inra.ijpb.color.ColorMaps.CommonLabelMaps: Colormap containing gray values
GrayscaleAreaOpeningPlugin - Class in inra.ijpb.plugins: Select binary particles in a planar image based on number of pixels.
GrayscaleAreaOpeningPlugin() - Constructor for class inra.ijpb.plugins.GrayscaleAreaOpeningPlugin
GrayscaleAttributeFiltering3D - Class in inra.ijpb.plugins: Plugin to perform between attribute opening, closing, and black or white top-hat on a 3D grayscale image.
GrayscaleAttributeFiltering3D() - Constructor for class inra.ijpb.plugins.GrayscaleAttributeFiltering3D
GrayscaleAttributeFilteringPlugin - Class in inra.ijpb.plugins: Select binary particles in a planar image based on number of pixels.
GrayscaleAttributeFilteringPlugin() - Constructor for class inra.ijpb.plugins.GrayscaleAttributeFilteringPlugin
GrayscaleBoxDiameterOpeningPlugin - Class in inra.ijpb.plugins: Select binary particles in a planar image based on number of pixels.
GrayscaleBoxDiameterOpeningPlugin() - Constructor for class inra.ijpb.plugins.GrayscaleBoxDiameterOpeningPlugin
GREEN - inra.ijpb.color.CommonColors: The green color
GREEN - inra.ijpb.util.CommonColors: Deprecated.

The green color
GT - inra.ijpb.plugins.LabelSizeFilteringPlugin.Operation: The operator for "greater than"
GT - Static variable in interface inra.ijpb.label.select.RelationalOperator: Implementation of the "Greater Than" operator.

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